Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CLDN1O95832 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
CLDN1O95832 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.82■■□□□ 1.08
CLDN1O95832 AL135925.1-201ENST00000605920 1701 ntBASIC21.82■■□□□ 1.08
CLDN1O95832 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN1O95832 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN1O95832 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN1O95832 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLDN1O95832 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CLDN1O95832 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
CLDN1O95832 Z92544.1-202ENST00000571933 1220 ntBASIC21.8■■□□□ 1.08
CLDN1O95832 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN1O95832 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN1O95832 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLDN1O95832 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN1O95832 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN1O95832 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.77■■□□□ 1.08
CLDN1O95832 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.77■■□□□ 1.08
CLDN1O95832 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN1O95832 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CLDN1O95832 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CLDN1O95832 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN1O95832 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN1O95832 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN1O95832 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN1O95832 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN1O95832 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.75■■□□□ 1.07
CLDN1O95832 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN1O95832 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLDN1O95832 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN1O95832 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN1O95832 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN1O95832 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
CLDN1O95832 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CLDN1O95832 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN1O95832 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN1O95832 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN1O95832 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN1O95832 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN1O95832 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CLDN1O95832 AC019171.1-201ENST00000601251 1056 ntBASIC21.72■■□□□ 1.07
CLDN1O95832 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.72■■□□□ 1.07
CLDN1O95832 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN1O95832 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN1O95832 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN1O95832 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLDN1O95832 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.71■■□□□ 1.07
CLDN1O95832 AL139246.5-201ENST00000606645 996 ntBASIC21.71■■□□□ 1.07
CLDN1O95832 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN1O95832 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN1O95832 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN1O95832 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN1O95832 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN1O95832 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDN1O95832 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.7■■□□□ 1.06
CLDN1O95832 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN1O95832 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN1O95832 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CLDN1O95832 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN1O95832 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN1O95832 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CLDN1O95832 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN1O95832 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN1O95832 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN1O95832 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN1O95832 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.69■■□□□ 1.06
CLDN1O95832 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN1O95832 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN1O95832 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN1O95832 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN1O95832 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN1O95832 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN1O95832 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CLDN1O95832 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN1O95832 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CLDN1O95832 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CLDN1O95832 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN1O95832 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN1O95832 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN1O95832 UNC93B8-201ENST00000511903 705 ntBASIC21.67■■□□□ 1.06
CLDN1O95832 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.67■■□□□ 1.06
CLDN1O95832 MIR4787-201ENST00000607364 84 ntBASIC21.67■■□□□ 1.06
CLDN1O95832 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.66■■□□□ 1.06
CLDN1O95832 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN1O95832 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN1O95832 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CLDN1O95832 LONRF2P2-201ENST00000439212 571 ntBASIC21.66■■□□□ 1.06
CLDN1O95832 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.66■■□□□ 1.06
CLDN1O95832 KRT125P-201ENST00000546827 989 ntBASIC21.66■■□□□ 1.06
CLDN1O95832 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.66■■□□□ 1.06
CLDN1O95832 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN1O95832 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.66■■□□□ 1.06
CLDN1O95832 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN1O95832 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN1O95832 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN1O95832 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN1O95832 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN1O95832 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN1O95832 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN1O95832 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms