Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NKX2-2O95096 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.61■■□□□ 1.21
NKX2-2O95096 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.61■■□□□ 1.21
NKX2-2O95096 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
NKX2-2O95096 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NKX2-2O95096 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
NKX2-2O95096 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NKX2-2O95096 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.6■■□□□ 1.21
NKX2-2O95096 AC025884.2-201ENST00000553429 711 ntBASIC22.6■■□□□ 1.21
NKX2-2O95096 AC145676.1-201ENST00000514988 2004 ntBASIC22.6■■□□□ 1.21
NKX2-2O95096 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NKX2-2O95096 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.59■■□□□ 1.21
NKX2-2O95096 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
NKX2-2O95096 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
NKX2-2O95096 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NKX2-2O95096 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NKX2-2O95096 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.58■■□□□ 1.21
NKX2-2O95096 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NKX2-2O95096 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
NKX2-2O95096 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.58■■□□□ 1.21
NKX2-2O95096 ECEL1P2-201ENST00000461596 1295 ntBASIC22.58■■□□□ 1.21
NKX2-2O95096 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
NKX2-2O95096 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
NKX2-2O95096 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.58■■□□□ 1.2
NKX2-2O95096 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NKX2-2O95096 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
NKX2-2O95096 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.57■■□□□ 1.2
NKX2-2O95096 DUSP8P4-201ENST00000399538 1761 ntBASIC22.57■■□□□ 1.2
NKX2-2O95096 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.57■■□□□ 1.2
NKX2-2O95096 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NKX2-2O95096 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.57■■□□□ 1.2
NKX2-2O95096 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.56■■□□□ 1.2
NKX2-2O95096 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
NKX2-2O95096 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NKX2-2O95096 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NKX2-2O95096 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.55■■□□□ 1.2
NKX2-2O95096 GPX1-201ENST00000419349 1106 ntBASIC22.55■■□□□ 1.2
NKX2-2O95096 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NKX2-2O95096 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.55■■□□□ 1.2
NKX2-2O95096 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NKX2-2O95096 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NKX2-2O95096 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NKX2-2O95096 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NKX2-2O95096 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NKX2-2O95096 SMPD5-203ENST00000639008 1464 ntBASIC22.54■■□□□ 1.2
NKX2-2O95096 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NKX2-2O95096 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NKX2-2O95096 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.54■■□□□ 1.2
NKX2-2O95096 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NKX2-2O95096 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.53■■□□□ 1.2
NKX2-2O95096 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.53■■□□□ 1.2
NKX2-2O95096 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.53■■□□□ 1.2
NKX2-2O95096 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NKX2-2O95096 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NKX2-2O95096 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NKX2-2O95096 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.52■■□□□ 1.2
NKX2-2O95096 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.52■■□□□ 1.2
NKX2-2O95096 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
NKX2-2O95096 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NKX2-2O95096 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.52■■□□□ 1.2
NKX2-2O95096 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NKX2-2O95096 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NKX2-2O95096 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NKX2-2O95096 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NKX2-2O95096 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NKX2-2O95096 MIR3960-201ENST00000583311 91 ntBASIC22.51■■□□□ 1.19
NKX2-2O95096 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NKX2-2O95096 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NKX2-2O95096 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.5■■□□□ 1.19
NKX2-2O95096 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NKX2-2O95096 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NKX2-2O95096 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.5■■□□□ 1.19
NKX2-2O95096 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NKX2-2O95096 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.49■■□□□ 1.19
NKX2-2O95096 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NKX2-2O95096 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.49■■□□□ 1.19
NKX2-2O95096 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.49■■□□□ 1.19
NKX2-2O95096 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.49■■□□□ 1.19
NKX2-2O95096 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NKX2-2O95096 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
NKX2-2O95096 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NKX2-2O95096 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.48■■□□□ 1.19
NKX2-2O95096 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.48■■□□□ 1.19
NKX2-2O95096 AC010501.1-201ENST00000606270 1962 ntBASIC22.48■■□□□ 1.19
NKX2-2O95096 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.48■■□□□ 1.19
NKX2-2O95096 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NKX2-2O95096 ERN1-208ENST00000606895 2068 ntBASIC22.48■■□□□ 1.19
NKX2-2O95096 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NKX2-2O95096 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
NKX2-2O95096 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NKX2-2O95096 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.47■■□□□ 1.19
NKX2-2O95096 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
NKX2-2O95096 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.47■■□□□ 1.19
NKX2-2O95096 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
NKX2-2O95096 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-2O95096 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-2O95096 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-2O95096 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.46■■□□□ 1.19
NKX2-2O95096 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-2O95096 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms