Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS4O43181 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
NDUFS4O43181 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS4O43181 AC025884.2-201ENST00000553429 711 ntBASIC23.37■■□□□ 1.33
NDUFS4O43181 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFS4O43181 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.37■■□□□ 1.33
NDUFS4O43181 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS4O43181 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS4O43181 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.36■■□□□ 1.33
NDUFS4O43181 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS4O43181 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS4O43181 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.36■■□□□ 1.33
NDUFS4O43181 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
NDUFS4O43181 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
NDUFS4O43181 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS4O43181 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS4O43181 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
NDUFS4O43181 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS4O43181 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS4O43181 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS4O43181 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NDUFS4O43181 RARRES2P2-201ENST00000394842 485 ntBASIC23.35■■□□□ 1.33
NDUFS4O43181 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.35■■□□□ 1.33
NDUFS4O43181 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.35■■□□□ 1.33
NDUFS4O43181 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.35■■□□□ 1.33
NDUFS4O43181 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NDUFS4O43181 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
NDUFS4O43181 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NDUFS4O43181 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
NDUFS4O43181 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS4O43181 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS4O43181 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.33■■□□□ 1.33
NDUFS4O43181 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS4O43181 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NDUFS4O43181 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.33■■□□□ 1.33
NDUFS4O43181 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.33■■□□□ 1.33
NDUFS4O43181 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NDUFS4O43181 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NDUFS4O43181 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.32■■□□□ 1.32
NDUFS4O43181 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.32■■□□□ 1.32
NDUFS4O43181 MIR3960-201ENST00000583311 91 ntBASIC23.32■■□□□ 1.32
NDUFS4O43181 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NDUFS4O43181 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.31■■□□□ 1.32
NDUFS4O43181 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS4O43181 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS4O43181 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.31■■□□□ 1.32
NDUFS4O43181 AC007029.1-201ENST00000604183 313 ntBASIC23.31■■□□□ 1.32
NDUFS4O43181 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NDUFS4O43181 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NDUFS4O43181 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.31■■□□□ 1.32
NDUFS4O43181 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.3■■□□□ 1.32
NDUFS4O43181 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.3■■□□□ 1.32
NDUFS4O43181 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
NDUFS4O43181 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.3■■□□□ 1.32
NDUFS4O43181 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
NDUFS4O43181 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS4O43181 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS4O43181 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFS4O43181 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NDUFS4O43181 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
NDUFS4O43181 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NDUFS4O43181 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS4O43181 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NDUFS4O43181 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.27■■□□□ 1.32
NDUFS4O43181 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS4O43181 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS4O43181 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NDUFS4O43181 AC091060.1-201ENST00000623524 1766 ntBASIC23.27■■□□□ 1.32
NDUFS4O43181 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS4O43181 RP9P-202ENST00000450133 1212 ntBASIC23.26■■□□□ 1.31
NDUFS4O43181 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS4O43181 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NDUFS4O43181 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NDUFS4O43181 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.25■■□□□ 1.31
NDUFS4O43181 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.25■■□□□ 1.31
NDUFS4O43181 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
NDUFS4O43181 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS4O43181 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS4O43181 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.24■■□□□ 1.31
NDUFS4O43181 AC092803.2-201ENST00000564287 1899 ntBASIC23.24■■□□□ 1.31
NDUFS4O43181 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS4O43181 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS4O43181 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS4O43181 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NDUFS4O43181 AC093536.1-201ENST00000569153 554 ntBASIC23.23■■□□□ 1.31
NDUFS4O43181 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.22■■□□□ 1.31
NDUFS4O43181 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.22■■□□□ 1.31
NDUFS4O43181 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NDUFS4O43181 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NDUFS4O43181 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NDUFS4O43181 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NDUFS4O43181 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.21■■□□□ 1.31
NDUFS4O43181 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
NDUFS4O43181 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.21■■□□□ 1.31
NDUFS4O43181 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NDUFS4O43181 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NDUFS4O43181 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NDUFS4O43181 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NDUFS4O43181 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NDUFS4O43181 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms