Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNFSF11O14788 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.93■■□□□ 1.1
TNFSF11O14788 U85056.1-201ENST00000616429 682 ntBASIC21.93■■□□□ 1.1
TNFSF11O14788 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TNFSF11O14788 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFSF11O14788 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFSF11O14788 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFSF11O14788 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFSF11O14788 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TNFSF11O14788 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFSF11O14788 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFSF11O14788 AC009831.1-201ENST00000580420 1582 ntBASIC21.91■■□□□ 1.1
TNFSF11O14788 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFSF11O14788 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
TNFSF11O14788 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.91■■□□□ 1.1
TNFSF11O14788 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TNFSF11O14788 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.91■■□□□ 1.1
TNFSF11O14788 NTF6A-201ENST00000591175 560 ntBASIC21.91■■□□□ 1.1
TNFSF11O14788 AC026202.3-201ENST00000600805 1127 ntBASIC21.91■■□□□ 1.1
TNFSF11O14788 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFSF11O14788 AC133552.2-201ENST00000619106 1032 ntBASIC21.91■■□□□ 1.1
TNFSF11O14788 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
TNFSF11O14788 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
TNFSF11O14788 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFSF11O14788 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TNFSF11O14788 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.9■■□□□ 1.1
TNFSF11O14788 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFSF11O14788 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFSF11O14788 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFSF11O14788 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.89■■□□□ 1.09
TNFSF11O14788 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.88■■□□□ 1.09
TNFSF11O14788 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNFSF11O14788 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.88■■□□□ 1.09
TNFSF11O14788 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TNFSF11O14788 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNFSF11O14788 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.87■■□□□ 1.09
TNFSF11O14788 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNFSF11O14788 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.87■■□□□ 1.09
TNFSF11O14788 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TNFSF11O14788 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.87■■□□□ 1.09
TNFSF11O14788 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNFSF11O14788 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TNFSF11O14788 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.87■■□□□ 1.09
TNFSF11O14788 RAP2CP1-202ENST00000605179 643 ntBASIC21.87■■□□□ 1.09
TNFSF11O14788 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TNFSF11O14788 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFSF11O14788 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.86■■□□□ 1.09
TNFSF11O14788 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TNFSF11O14788 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TNFSF11O14788 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF11O14788 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF11O14788 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF11O14788 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.85■■□□□ 1.09
TNFSF11O14788 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF11O14788 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF11O14788 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF11O14788 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFSF11O14788 AL592293.1-201ENST00000502889 1188 ntBASIC21.84■■□□□ 1.09
TNFSF11O14788 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFSF11O14788 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
TNFSF11O14788 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
TNFSF11O14788 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF11O14788 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF11O14788 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFSF11O14788 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFSF11O14788 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
TNFSF11O14788 KRT18P60-201ENST00000312876 1297 ntBASIC21.82■■□□□ 1.08
TNFSF11O14788 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF11O14788 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TNFSF11O14788 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF11O14788 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF11O14788 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.82■■□□□ 1.08
TNFSF11O14788 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFSF11O14788 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.82■■□□□ 1.08
TNFSF11O14788 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
TNFSF11O14788 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFSF11O14788 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFSF11O14788 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFSF11O14788 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFSF11O14788 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.81■■□□□ 1.08
TNFSF11O14788 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.81■■□□□ 1.08
TNFSF11O14788 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNFSF11O14788 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TNFSF11O14788 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF11O14788 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.8■■□□□ 1.08
TNFSF11O14788 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFSF11O14788 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFSF11O14788 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF11O14788 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF11O14788 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF11O14788 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF11O14788 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF11O14788 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms