Protein–RNA interactions for Protein: A7E2V4

ZSWIM8, Zinc finger SWIM domain-containing protein 8, humanhuman

Predictions only

Length 1,837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8A7E2V4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZSWIM8A7E2V4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.12
ZSWIM8A7E2V4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.26■■■□□ 2.11
ZSWIM8A7E2V4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
ZSWIM8A7E2V4 UNC93B8-201ENST00000511903 705 ntBASIC28.26■■■□□ 2.11
ZSWIM8A7E2V4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ZSWIM8A7E2V4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZSWIM8A7E2V4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM8A7E2V4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM8A7E2V4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM8A7E2V4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.25■■■□□ 2.11
ZSWIM8A7E2V4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.24■■■□□ 2.11
ZSWIM8A7E2V4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.24■■■□□ 2.11
ZSWIM8A7E2V4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM8A7E2V4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.23■■■□□ 2.11
ZSWIM8A7E2V4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM8A7E2V4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZSWIM8A7E2V4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
ZSWIM8A7E2V4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZSWIM8A7E2V4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZSWIM8A7E2V4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZSWIM8A7E2V4 KRT16P3-201ENST00000439127 1283 ntBASIC28.21■■■□□ 2.11
ZSWIM8A7E2V4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.21■■■□□ 2.11
ZSWIM8A7E2V4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
ZSWIM8A7E2V4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.11
ZSWIM8A7E2V4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZSWIM8A7E2V4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.2■■■□□ 2.1
ZSWIM8A7E2V4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ZSWIM8A7E2V4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZSWIM8A7E2V4 AC131281.2-201ENST00000520478 145 ntBASIC28.19■■■□□ 2.1
ZSWIM8A7E2V4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.19■■■□□ 2.1
ZSWIM8A7E2V4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZSWIM8A7E2V4 AC087393.1-201ENST00000582896 145 ntBASIC28.18■■■□□ 2.1
ZSWIM8A7E2V4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.18■■■□□ 2.1
ZSWIM8A7E2V4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZSWIM8A7E2V4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
ZSWIM8A7E2V4 AC019171.1-201ENST00000601251 1056 ntBASIC28.17■■■□□ 2.1
ZSWIM8A7E2V4 ABCB10P3-201ENST00000561950 2166 ntBASIC28.17■■■□□ 2.1
ZSWIM8A7E2V4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.16■■■□□ 2.1
ZSWIM8A7E2V4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.16■■■□□ 2.1
ZSWIM8A7E2V4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZSWIM8A7E2V4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZSWIM8A7E2V4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZSWIM8A7E2V4 MIR4787-201ENST00000607364 84 ntBASIC28.15■■■□□ 2.1
ZSWIM8A7E2V4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZSWIM8A7E2V4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZSWIM8A7E2V4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ZSWIM8A7E2V4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZSWIM8A7E2V4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.14■■■□□ 2.1
ZSWIM8A7E2V4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
ZSWIM8A7E2V4 AP002414.2-202ENST00000590929 1450 ntBASIC28.14■■■□□ 2.09
ZSWIM8A7E2V4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM8A7E2V4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ZSWIM8A7E2V4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.12■■■□□ 2.09
ZSWIM8A7E2V4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.12■■■□□ 2.09
ZSWIM8A7E2V4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.12■■■□□ 2.09
ZSWIM8A7E2V4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZSWIM8A7E2V4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.11■■■□□ 2.09
ZSWIM8A7E2V4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.11■■■□□ 2.09
ZSWIM8A7E2V4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZSWIM8A7E2V4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
ZSWIM8A7E2V4 BX664725.1-201ENST00000438252 379 ntBASIC28.11■■■□□ 2.09
ZSWIM8A7E2V4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZSWIM8A7E2V4 ABCB10P1-201ENST00000614297 2181 ntBASIC28.1■■■□□ 2.09
ZSWIM8A7E2V4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.1■■■□□ 2.09
ZSWIM8A7E2V4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.1■■■□□ 2.09
ZSWIM8A7E2V4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZSWIM8A7E2V4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.08■■■□□ 2.09
ZSWIM8A7E2V4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZSWIM8A7E2V4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.08■■■□□ 2.09
ZSWIM8A7E2V4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.08■■■□□ 2.09
ZSWIM8A7E2V4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZSWIM8A7E2V4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.08■■■□□ 2.08
ZSWIM8A7E2V4 LONRF2P2-201ENST00000439212 571 ntBASIC28.07■■■□□ 2.08
ZSWIM8A7E2V4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ZSWIM8A7E2V4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZSWIM8A7E2V4 RPS2P7-201ENST00000447334 885 ntBASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
ZSWIM8A7E2V4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.05■■■□□ 2.08
ZSWIM8A7E2V4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ZSWIM8A7E2V4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ZSWIM8A7E2V4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.05■■■□□ 2.08
ZSWIM8A7E2V4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ZSWIM8A7E2V4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ZSWIM8A7E2V4 KRT125P-201ENST00000546827 989 ntBASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 505 ms