Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HTR3EA5X5Y0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.33■■□□□ 1.16
HTR3EA5X5Y0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
HTR3EA5X5Y0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
HTR3EA5X5Y0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.32■■□□□ 1.16
HTR3EA5X5Y0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HTR3EA5X5Y0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HTR3EA5X5Y0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HTR3EA5X5Y0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HTR3EA5X5Y0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HTR3EA5X5Y0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.32■■□□□ 1.16
HTR3EA5X5Y0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 DUX4L11-201ENST00000611504 1267 ntBASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 DUX4L12-201ENST00000614593 1267 ntBASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 DUX4L14-201ENST00000621227 1267 ntBASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
HTR3EA5X5Y0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.3■■□□□ 1.16
HTR3EA5X5Y0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HTR3EA5X5Y0 DUSP8P4-201ENST00000399538 1761 ntBASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 AC092803.2-201ENST00000564287 1899 ntBASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HTR3EA5X5Y0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HTR3EA5X5Y0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
HTR3EA5X5Y0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
HTR3EA5X5Y0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HTR3EA5X5Y0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HTR3EA5X5Y0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HTR3EA5X5Y0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 AC020928.2-201ENST00000588717 2197 ntBASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR3EA5X5Y0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HTR3EA5X5Y0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HTR3EA5X5Y0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HTR3EA5X5Y0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
HTR3EA5X5Y0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HTR3EA5X5Y0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR3EA5X5Y0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR3EA5X5Y0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR3EA5X5Y0 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms