Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV4S1A1TA0A5B7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.49■□□□□ 0.71
TCRBV4S1A1TA0A5B7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV4S1A1TA0A5B7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV4S1A1TA0A5B7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV4S1A1TA0A5B7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBV4S1A1TA0A5B7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TCRBV4S1A1TA0A5B7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV4S1A1TA0A5B7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV4S1A1TA0A5B7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV4S1A1TA0A5B7 AC012354.3-201ENST00000623734 483 ntBASIC19.47■□□□□ 0.71
TCRBV4S1A1TA0A5B7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV4S1A1TA0A5B7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV4S1A1TA0A5B7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 AL359258.2-201ENST00000564063 1566 ntBASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 AC135731.1-201ENST00000569415 2548 ntBASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TCRBV4S1A1TA0A5B7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV4S1A1TA0A5B7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV4S1A1TA0A5B7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV4S1A1TA0A5B7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV4S1A1TA0A5B7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV4S1A1TA0A5B7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TCRBV4S1A1TA0A5B7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV4S1A1TA0A5B7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV4S1A1TA0A5B7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV4S1A1TA0A5B7 U85056.1-201ENST00000616429 682 ntBASIC19.44■□□□□ 0.7
TCRBV4S1A1TA0A5B7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.44■□□□□ 0.7
TCRBV4S1A1TA0A5B7 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.44■□□□□ 0.7
TCRBV4S1A1TA0A5B7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV4S1A1TA0A5B7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV4S1A1TA0A5B7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV4S1A1TA0A5B7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.43■□□□□ 0.7
TCRBV4S1A1TA0A5B7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV4S1A1TA0A5B7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TCRBV4S1A1TA0A5B7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV4S1A1TA0A5B7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TCRBV4S1A1TA0A5B7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV4S1A1TA0A5B7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV4S1A1TA0A5B7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.42■□□□□ 0.7
TCRBV4S1A1TA0A5B7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TCRBV4S1A1TA0A5B7 AP004609.3-201ENST00000610705 1884 ntBASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRBV4S1A1TA0A5B7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV4S1A1TA0A5B7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV4S1A1TA0A5B7 AL157400.5-201ENST00000507624 621 ntBASIC19.4■□□□□ 0.7
TCRBV4S1A1TA0A5B7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.4■□□□□ 0.7
TCRBV4S1A1TA0A5B7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TCRBV4S1A1TA0A5B7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBV4S1A1TA0A5B7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.39■□□□□ 0.7
TCRBV4S1A1TA0A5B7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV4S1A1TA0A5B7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 AC092803.2-201ENST00000564287 1899 ntBASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 SMPD5-203ENST00000639008 1464 ntBASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.38■□□□□ 0.69
TCRBV4S1A1TA0A5B7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TCRBV4S1A1TA0A5B7 DUSP8P4-201ENST00000399538 1761 ntBASIC19.37■□□□□ 0.69
TCRBV4S1A1TA0A5B7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.37■□□□□ 0.69
TCRBV4S1A1TA0A5B7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV4S1A1TA0A5B7 AL033527.3-201ENST00000566366 1196 ntBASIC19.37■□□□□ 0.69
TCRBV4S1A1TA0A5B7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV4S1A1TA0A5B7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV4S1A1TA0A5B7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV4S1A1TA0A5B7 AC007029.1-201ENST00000604183 313 ntBASIC19.36■□□□□ 0.69
TCRBV4S1A1TA0A5B7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV4S1A1TA0A5B7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV4S1A1TA0A5B7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms