Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRGV5A0A0B4J1U4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
TRGV5A0A0B4J1U4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRGV5A0A0B4J1U4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.02■■□□□ 1.12
TRGV5A0A0B4J1U4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRGV5A0A0B4J1U4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.02■■□□□ 1.12
TRGV5A0A0B4J1U4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRGV5A0A0B4J1U4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TRGV5A0A0B4J1U4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRGV5A0A0B4J1U4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
TRGV5A0A0B4J1U4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
TRGV5A0A0B4J1U4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRGV5A0A0B4J1U4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRGV5A0A0B4J1U4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRGV5A0A0B4J1U4 HYI-210ENST00000486909 905 ntTSL 5 BASIC22■■□□□ 1.11
TRGV5A0A0B4J1U4 AC139795.1-202ENST00000500444 432 ntBASIC22■■□□□ 1.11
TRGV5A0A0B4J1U4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TRGV5A0A0B4J1U4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRGV5A0A0B4J1U4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRGV5A0A0B4J1U4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.99■■□□□ 1.11
TRGV5A0A0B4J1U4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
TRGV5A0A0B4J1U4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TRGV5A0A0B4J1U4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.99■■□□□ 1.11
TRGV5A0A0B4J1U4 RARRES2P1-201ENST00000474487 481 ntBASIC21.98■■□□□ 1.11
TRGV5A0A0B4J1U4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.98■■□□□ 1.11
TRGV5A0A0B4J1U4 AC074183.2-201ENST00000623112 922 ntBASIC21.98■■□□□ 1.11
TRGV5A0A0B4J1U4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
TRGV5A0A0B4J1U4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRGV5A0A0B4J1U4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRGV5A0A0B4J1U4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRGV5A0A0B4J1U4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
TRGV5A0A0B4J1U4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRGV5A0A0B4J1U4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.97■■□□□ 1.11
TRGV5A0A0B4J1U4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.97■■□□□ 1.11
TRGV5A0A0B4J1U4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.97■■□□□ 1.11
TRGV5A0A0B4J1U4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRGV5A0A0B4J1U4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRGV5A0A0B4J1U4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.96■■□□□ 1.11
TRGV5A0A0B4J1U4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRGV5A0A0B4J1U4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRGV5A0A0B4J1U4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.95■■□□□ 1.1
TRGV5A0A0B4J1U4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRGV5A0A0B4J1U4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.95■■□□□ 1.1
TRGV5A0A0B4J1U4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.95■■□□□ 1.1
TRGV5A0A0B4J1U4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.95■■□□□ 1.1
TRGV5A0A0B4J1U4 AC142472.1-201ENST00000612013 1741 ntBASIC21.94■■□□□ 1.1
TRGV5A0A0B4J1U4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.94■■□□□ 1.1
TRGV5A0A0B4J1U4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
TRGV5A0A0B4J1U4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.94■■□□□ 1.1
TRGV5A0A0B4J1U4 AC010980.1-201ENST00000587192 1142 ntBASIC21.94■■□□□ 1.1
TRGV5A0A0B4J1U4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.94■■□□□ 1.1
TRGV5A0A0B4J1U4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
TRGV5A0A0B4J1U4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRGV5A0A0B4J1U4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRGV5A0A0B4J1U4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRGV5A0A0B4J1U4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRGV5A0A0B4J1U4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.91■■□□□ 1.1
TRGV5A0A0B4J1U4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.91■■□□□ 1.1
TRGV5A0A0B4J1U4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRGV5A0A0B4J1U4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRGV5A0A0B4J1U4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRGV5A0A0B4J1U4 AP004609.3-201ENST00000610705 1884 ntBASIC21.9■■□□□ 1.1
TRGV5A0A0B4J1U4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.9■■□□□ 1.1
TRGV5A0A0B4J1U4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.9■■□□□ 1.1
TRGV5A0A0B4J1U4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRGV5A0A0B4J1U4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRGV5A0A0B4J1U4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
TRGV5A0A0B4J1U4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.89■■□□□ 1.09
TRGV5A0A0B4J1U4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TRGV5A0A0B4J1U4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRGV5A0A0B4J1U4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.88■■□□□ 1.09
TRGV5A0A0B4J1U4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
TRGV5A0A0B4J1U4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRGV5A0A0B4J1U4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRGV5A0A0B4J1U4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TRGV5A0A0B4J1U4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.87■■□□□ 1.09
TRGV5A0A0B4J1U4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms