Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV7-1A0A0A6YYK4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV7-1A0A0A6YYK4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV7-1A0A0A6YYK4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRBV7-1A0A0A6YYK4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV7-1A0A0A6YYK4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 AC092296.2-201ENST00000589470 999 ntBASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-1A0A0A6YYK4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 ECEL1P2-201ENST00000461596 1295 ntBASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 AL157400.5-201ENST00000507624 621 ntBASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRBV7-1A0A0A6YYK4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV7-1A0A0A6YYK4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.89■□□□□ 0.61
TRBV7-1A0A0A6YYK4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV7-1A0A0A6YYK4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV7-1A0A0A6YYK4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV7-1A0A0A6YYK4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV7-1A0A0A6YYK4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRBV7-1A0A0A6YYK4 MIR3960-201ENST00000583311 91 ntBASIC18.88■□□□□ 0.61
TRBV7-1A0A0A6YYK4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV7-1A0A0A6YYK4 SMPD5-203ENST00000639008 1464 ntBASIC18.88■□□□□ 0.61
TRBV7-1A0A0A6YYK4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV7-1A0A0A6YYK4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 AC025884.2-201ENST00000553429 711 ntBASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.87■□□□□ 0.61
TRBV7-1A0A0A6YYK4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 DUSP8P4-201ENST00000399538 1761 ntBASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-1A0A0A6YYK4 GPX1-201ENST00000419349 1106 ntBASIC18.85■□□□□ 0.61
TRBV7-1A0A0A6YYK4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV7-1A0A0A6YYK4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV7-1A0A0A6YYK4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV7-1A0A0A6YYK4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRBV7-1A0A0A6YYK4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV7-1A0A0A6YYK4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV7-1A0A0A6YYK4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRBV7-1A0A0A6YYK4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV7-1A0A0A6YYK4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.83■□□□□ 0.61
TRBV7-1A0A0A6YYK4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV7-1A0A0A6YYK4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV7-1A0A0A6YYK4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-1A0A0A6YYK4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-1A0A0A6YYK4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-1A0A0A6YYK4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV7-1A0A0A6YYK4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV7-1A0A0A6YYK4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV7-1A0A0A6YYK4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.82■□□□□ 0.6
TRBV7-1A0A0A6YYK4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TRBV7-1A0A0A6YYK4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-1A0A0A6YYK4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-1A0A0A6YYK4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 AC010501.1-201ENST00000606270 1962 ntBASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV7-1A0A0A6YYK4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV7-1A0A0A6YYK4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV7-1A0A0A6YYK4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.8■□□□□ 0.6
TRBV7-1A0A0A6YYK4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV7-1A0A0A6YYK4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms