Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 AP005901.3-202ENST00000581653 237 ntBASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL27Q9Y4X3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL27Q9Y4X3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 AC016734.2-201ENST00000624325 1377 ntBASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.68■□□□□ 0.26
CCL27Q9Y4X3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms