Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 PRORSD1P-201ENST00000295112 541 ntBASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 AL158047.1-201ENST00000445918 881 ntBASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 AC128688.1-201ENST00000487626 519 ntBASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 LINC02012-201ENST00000608206 1725 ntBASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 MIR1238-201ENST00000408483 83 ntBASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 AC098590.1-201ENST00000468126 897 ntBASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 EGLN1P1-201ENST00000531623 762 ntBASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 MIR4785-201ENST00000585005 73 ntBASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2D4Q9Y2X8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
UBE2D4Q9Y2X8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms