Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GPR32P1-201ENST00000601788 811 ntBASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 AL118508.1-201ENST00000613502 2345 ntBASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 AC011558.1-201ENST00000623459 338 ntBASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2J3Q9H1A7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2J3Q9H1A7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.21■□□□□ 0.18
POLR2J3Q9H1A7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2J3Q9H1A7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2J3Q9H1A7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2J3Q9H1A7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2J3Q9H1A7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2J3Q9H1A7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AC097374.2-201ENST00000618617 1306 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AL137013.1-201ENST00000432946 1228 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AC002558.1-201ENST00000488906 803 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 YBX1P2-201ENST00000489612 999 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AC012306.2-201ENST00000609350 630 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AC005363.2-201ENST00000618631 242 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AC097493.4-201ENST00000641197 219 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AL353692.3-201ENST00000407031 1396 ntBASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
POLR2J3Q9H1A7 LINC01311-201ENST00000565162 1445 ntBASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
POLR2J3Q9H1A7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms