Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC58Q96CX6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC58Q96CX6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 AC046158.3-201ENST00000624947 2558 ntBASIC16.67■□□□□ 0.26
LRRC58Q96CX6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 AC092053.1-201ENST00000605787 1936 ntBASIC16.67■□□□□ 0.26
LRRC58Q96CX6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 AC093525.9-201ENST00000624961 1746 ntBASIC16.67■□□□□ 0.26
LRRC58Q96CX6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 CYP2D8P-201ENST00000433633 1490 ntBASIC16.67■□□□□ 0.26
LRRC58Q96CX6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC58Q96CX6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 SLC25A1P3-201ENST00000395415 828 ntBASIC16.66■□□□□ 0.26
LRRC58Q96CX6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 AP000523.1-201ENST00000398242 1049 ntBASIC16.66■□□□□ 0.26
LRRC58Q96CX6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC58Q96CX6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms