Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM50Q86XT4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.52■□□□□ 0.71
TRIM50Q86XT4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM50Q86XT4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 AC023274.1-201ENST00000418278 595 ntBASIC19.51■□□□□ 0.71
TRIM50Q86XT4 AC108073.2-201ENST00000464002 357 ntBASIC19.51■□□□□ 0.71
TRIM50Q86XT4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 BICD1-207ENST00000551848 1962 ntBASIC19.51■□□□□ 0.71
TRIM50Q86XT4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM50Q86XT4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 AC097637.2-201ENST00000624096 1997 ntBASIC19.5■□□□□ 0.71
TRIM50Q86XT4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 KRT18P2-201ENST00000447938 1258 ntBASIC19.5■□□□□ 0.71
TRIM50Q86XT4 AC002558.1-201ENST00000488906 803 ntBASIC19.5■□□□□ 0.71
TRIM50Q86XT4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 PGM5P2-202ENST00000637225 1043 ntBASIC19.5■□□□□ 0.71
TRIM50Q86XT4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 REXO1L11P-201ENST00000620964 1927 ntBASIC19.5■□□□□ 0.71
TRIM50Q86XT4 ABALON-201ENST00000629058 1903 ntBASIC19.5■□□□□ 0.71
TRIM50Q86XT4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM50Q86XT4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.49■□□□□ 0.71
TRIM50Q86XT4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 RPS15P9-201ENST00000494093 319 ntBASIC19.49■□□□□ 0.71
TRIM50Q86XT4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 AC055717.3-201ENST00000622967 595 ntBASIC19.49■□□□□ 0.71
TRIM50Q86XT4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM50Q86XT4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms