Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB5BP61020 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB5BP61020 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB5BP61020 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB5BP61020 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RAB5BP61020 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 RBM17P2-201ENST00000616397 1405 ntBASIC13.73□□□□□ -0.21
RAB5BP61020 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB5BP61020 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 SLC7A5P2-201ENST00000553010 536 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4L2-201ENST00000561772 1275 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 CCDC92B-201ENST00000575506 885 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4L6-201ENST00000626483 1275 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4L1-201ENST00000627662 1275 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4L8-201ENST00000629013 1275 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4L3-201ENST00000630187 1275 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4L7-201ENST00000630678 1275 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 DUX4L5-201ENST00000630834 1275 ntBASIC13.72□□□□□ -0.21
RAB5BP61020 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB5BP61020 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB5BP61020 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB5BP61020 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RAB5BP61020 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RAB5BP61020 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RAB5BP61020 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
RAB5BP61020 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RAB5BP61020 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB5BP61020 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RAB5BP61020 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB5BP61020 AC026748.1-201ENST00000624349 3251 ntBASIC13.71□□□□□ -0.22
RAB5BP61020 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB5BP61020 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms