Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RPS15P9-201ENST00000494093 319 ntBASIC17.28■□□□□ 0.36
CLDN2P57739 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN2P57739 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN2P57739 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN2P57739 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLDN2P57739 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 AC108073.2-201ENST00000464002 357 ntBASIC17.27■□□□□ 0.36
CLDN2P57739 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 AC040169.1-201ENST00000565382 521 ntBASIC17.27■□□□□ 0.36
CLDN2P57739 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLDN2P57739 AC055717.3-201ENST00000622967 595 ntBASIC17.27■□□□□ 0.36
CLDN2P57739 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN2P57739 BICD1-207ENST00000551848 1962 ntBASIC17.27■□□□□ 0.36
CLDN2P57739 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN2P57739 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN2P57739 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN2P57739 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN2P57739 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLDN2P57739 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN2P57739 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN2P57739 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN2P57739 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.27■□□□□ 0.35
CLDN2P57739 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN2P57739 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN2P57739 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLDN2P57739 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN2P57739 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN2P57739 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN2P57739 YBX2P1-201ENST00000394192 760 ntBASIC17.26■□□□□ 0.35
CLDN2P57739 AC005104.2-201ENST00000427818 678 ntBASIC17.26■□□□□ 0.35
CLDN2P57739 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN2P57739 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CLDN2P57739 MIR4751-201ENST00000578027 74 ntBASIC17.26■□□□□ 0.35
CLDN2P57739 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CLDN2P57739 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.26■□□□□ 0.35
CLDN2P57739 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN2P57739 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLDN2P57739 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN2P57739 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 REXO1L11P-201ENST00000620964 1927 ntBASIC17.25■□□□□ 0.35
CLDN2P57739 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CLDN2P57739 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN2P57739 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN2P57739 AC018470.1-201ENST00000624790 3129 ntBASIC17.25■□□□□ 0.35
CLDN2P57739 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 LINC00982-205ENST00000420957 435 ntBASIC17.25■□□□□ 0.35
CLDN2P57739 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CLDN2P57739 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN2P57739 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN2P57739 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN2P57739 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN2P57739 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms