Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 ELK2BP-201ENST00000415014 1224 ntBASIC16.85■□□□□ 0.29
EPHA4P54764 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 KRT18P3-201ENST00000451602 1288 ntBASIC16.85■□□□□ 0.29
EPHA4P54764 AC108751.1-201ENST00000490852 363 ntBASIC16.85■□□□□ 0.29
EPHA4P54764 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 AC012183.1-201ENST00000625197 499 ntBASIC16.85■□□□□ 0.29
EPHA4P54764 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EPHA4P54764 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHA4P54764 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.84■□□□□ 0.29
EPHA4P54764 BX842568.4-201ENST00000421222 227 ntBASIC16.84■□□□□ 0.29
EPHA4P54764 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.84■□□□□ 0.29
EPHA4P54764 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.84■□□□□ 0.29
EPHA4P54764 RNA5SP416-201ENST00000516838 111 ntBASIC16.84■□□□□ 0.29
EPHA4P54764 PGAM5P1-201ENST00000518923 814 ntBASIC16.84■□□□□ 0.29
EPHA4P54764 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHA4P54764 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHA4P54764 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
EPHA4P54764 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
EPHA4P54764 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
EPHA4P54764 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA4P54764 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA4P54764 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
EPHA4P54764 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPHA4P54764 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPHA4P54764 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA4P54764 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA4P54764 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA4P54764 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA4P54764 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 GPR89P-201ENST00000407924 1495 ntBASIC16.83■□□□□ 0.28
EPHA4P54764 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EPHA4P54764 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 AC006504.4-201ENST00000592118 1568 ntBASIC16.83■□□□□ 0.28
EPHA4P54764 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EPHA4P54764 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
EPHA4P54764 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA4P54764 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.82■□□□□ 0.28
EPHA4P54764 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms