Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.73■□□□□ 0.59
RAD23BP54727 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAD23BP54727 AC009053.2-201ENST00000563701 2365 ntBASIC18.73■□□□□ 0.59
RAD23BP54727 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RAD23BP54727 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
RAD23BP54727 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.73■□□□□ 0.59
RAD23BP54727 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.73■□□□□ 0.59
RAD23BP54727 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 AC132008.2-207ENST00000454517 770 ntBASIC18.73■□□□□ 0.59
RAD23BP54727 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.73■□□□□ 0.59
RAD23BP54727 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.73■□□□□ 0.59
RAD23BP54727 AC091304.2-201ENST00000564639 760 ntBASIC18.73■□□□□ 0.59
RAD23BP54727 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAD23BP54727 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.73■□□□□ 0.59
RAD23BP54727 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
RAD23BP54727 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.73■□□□□ 0.59
RAD23BP54727 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.72■□□□□ 0.59
RAD23BP54727 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.72■□□□□ 0.59
RAD23BP54727 BCL2-203ENST00000589955 5011 ntBASIC18.72■□□□□ 0.59
RAD23BP54727 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.72■□□□□ 0.59
RAD23BP54727 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAD23BP54727 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RAD23BP54727 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAD23BP54727 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAD23BP54727 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAD23BP54727 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.72■□□□□ 0.59
RAD23BP54727 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.72■□□□□ 0.59
RAD23BP54727 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.72■□□□□ 0.59
RAD23BP54727 UNC93B7-201ENST00000509439 705 ntBASIC18.72■□□□□ 0.59
RAD23BP54727 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.72■□□□□ 0.59
RAD23BP54727 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAD23BP54727 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAD23BP54727 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
RAD23BP54727 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAD23BP54727 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RAD23BP54727 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD23BP54727 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD23BP54727 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
RAD23BP54727 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAD23BP54727 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD23BP54727 ABCD1P5-201ENST00000445663 754 ntBASIC18.71■□□□□ 0.59
RAD23BP54727 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.71■□□□□ 0.59
RAD23BP54727 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD23BP54727 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.71■□□□□ 0.59
RAD23BP54727 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.71■□□□□ 0.59
RAD23BP54727 AP000867.4-201ENST00000641616 219 ntBASIC18.71■□□□□ 0.59
RAD23BP54727 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAD23BP54727 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD23BP54727 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RAD23BP54727 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD23BP54727 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD23BP54727 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RAD23BP54727 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RAD23BP54727 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAD23BP54727 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RAD23BP54727 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAD23BP54727 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD23BP54727 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms