Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CHRNB1P11230 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CHRNB1P11230 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHRNB1P11230 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNB1P11230 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNB1P11230 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.7■□□□□ 0.42
CHRNB1P11230 LINC00982-205ENST00000420957 435 ntBASIC17.7■□□□□ 0.42
CHRNB1P11230 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNB1P11230 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.7■□□□□ 0.42
CHRNB1P11230 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.7■□□□□ 0.42
CHRNB1P11230 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNB1P11230 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNB1P11230 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNB1P11230 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNB1P11230 AC004835.2-201ENST00000603762 682 ntBASIC17.7■□□□□ 0.42
CHRNB1P11230 AC092902.6-201ENST00000641783 218 ntBASIC17.7■□□□□ 0.42
CHRNB1P11230 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CHRNB1P11230 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHRNB1P11230 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNB1P11230 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNB1P11230 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB1P11230 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB1P11230 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.69■□□□□ 0.42
CHRNB1P11230 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNB1P11230 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 AC004461.1-201ENST00000412461 403 ntBASIC17.69■□□□□ 0.42
CHRNB1P11230 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 AC004449.1-201ENST00000564240 433 ntBASIC17.69■□□□□ 0.42
CHRNB1P11230 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRNB1P11230 AC105339.1-204ENST00000636249 355 ntBASIC17.69■□□□□ 0.42
CHRNB1P11230 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 AC009336.1-201ENST00000608941 1553 ntBASIC17.69■□□□□ 0.42
CHRNB1P11230 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB1P11230 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB1P11230 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB1P11230 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CHRNB1P11230 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNB1P11230 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 AL133373.2-201ENST00000623187 2828 ntBASIC17.68■□□□□ 0.42
CHRNB1P11230 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 BCRP1-201ENST00000444246 691 ntBASIC17.68■□□□□ 0.42
CHRNB1P11230 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRNB1P11230 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNB1P11230 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNB1P11230 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 AL096865.1-201ENST00000606796 927 ntBASIC17.68■□□□□ 0.42
CHRNB1P11230 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB1P11230 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNB1P11230 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB1P11230 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNB1P11230 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms