Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM235A6NFC5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15□□□□□ -0.01
TMEM235A6NFC5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15□□□□□ -0.01
TMEM235A6NFC5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15□□□□□ -0.01
TMEM235A6NFC5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15□□□□□ -0.01
TMEM235A6NFC5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15□□□□□ -0.01
TMEM235A6NFC5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TMEM235A6NFC5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM235A6NFC5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TMEM235A6NFC5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 AC012618.2-201ENST00000428058 849 ntBASIC14.99□□□□□ -0.01
TMEM235A6NFC5 AC233702.5-201ENST00000584107 538 ntBASIC14.99□□□□□ -0.01
TMEM235A6NFC5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 AC116353.5-201ENST00000638148 1699 ntBASIC14.99□□□□□ -0.01
TMEM235A6NFC5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM235A6NFC5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TMEM235A6NFC5 UNC93B2-201ENST00000285383 730 ntBASIC14.98□□□□□ -0.01
TMEM235A6NFC5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms