Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC116562.4-202ENST00000641738 218 ntBASIC19.06■□□□□ 0.64
CCDC66A2RUB6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 AC023824.1-201ENST00000562945 2975 ntBASIC19.05■□□□□ 0.64
CCDC66A2RUB6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.05■□□□□ 0.64
CCDC66A2RUB6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 MIR718-201ENST00000390190 70 ntBASIC19.05■□□□□ 0.64
CCDC66A2RUB6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC66A2RUB6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.04■□□□□ 0.64
CCDC66A2RUB6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 AC007663.1-201ENST00000438948 1240 ntBASIC19.04■□□□□ 0.64
CCDC66A2RUB6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 MIR4785-201ENST00000585005 73 ntBASIC19.04■□□□□ 0.64
CCDC66A2RUB6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC66A2RUB6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 AC010653.2-201ENST00000623505 997 ntBASIC19.03■□□□□ 0.64
CCDC66A2RUB6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms