Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 LYSMD4-203ENST00000378904 2122 ntBASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 HLA-L-209ENST00000420110 1011 ntBASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 TSPY17P-201ENST00000450329 467 ntBASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 KRT18P6-201ENST00000555540 1265 ntBASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 AL353719.1-201ENST00000566847 864 ntBASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 AL023803.3-201ENST00000615559 522 ntBASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV18A0A075B6X5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 AL135905.2-201ENST00000584934 1404 ntBASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 AL162727.3-201ENST00000635661 2787 ntBASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 AC116353.5-201ENST00000638148 1699 ntBASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 KRT18P29-201ENST00000397031 1267 ntBASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV18A0A075B6X5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms