Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 HOXB1-202ENST00000577092 1414 ntBASIC13.15□□□□□ -0.3
NUP35Q8NFH5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 AC092850.2-201ENST00000623821 2697 ntBASIC13.15□□□□□ -0.3
NUP35Q8NFH5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 FAM207BP-201ENST00000447172 505 ntBASIC13.15□□□□□ -0.3
NUP35Q8NFH5 KRT16P5-201ENST00000455284 522 ntBASIC13.15□□□□□ -0.3
NUP35Q8NFH5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 AC009065.1-201ENST00000564055 1225 ntBASIC13.15□□□□□ -0.3
NUP35Q8NFH5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 MIR4758-201ENST00000577688 71 ntBASIC13.15□□□□□ -0.3
NUP35Q8NFH5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 LYSMD4-203ENST00000378904 2122 ntBASIC13.15□□□□□ -0.3
NUP35Q8NFH5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP35Q8NFH5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
NUP35Q8NFH5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NUP35Q8NFH5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NUP35Q8NFH5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.15□□□□□ -0.31
NUP35Q8NFH5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 NIFKP9-201ENST00000419265 221 ntBASIC13.14□□□□□ -0.31
NUP35Q8NFH5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 AC008040.2-201ENST00000461049 708 ntBASIC13.14□□□□□ -0.31
NUP35Q8NFH5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 RARRES2P10-201ENST00000564312 460 ntBASIC13.14□□□□□ -0.31
NUP35Q8NFH5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 AC073111.5-205ENST00000641717 521 ntBASIC13.14□□□□□ -0.31
NUP35Q8NFH5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP35Q8NFH5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms