Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP13A4Q4VNC1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 CHCHD2P8-201ENST00000429873 447 ntBASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 AP002383.4-201ENST00000442518 975 ntBASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 AC087388.1-201ENST00000571370 1112 ntBASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 AL121672.3-201ENST00000608644 468 ntBASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP13A4Q4VNC1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 AL049757.1-201ENST00000616842 1596 ntBASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 AC002558.1-201ENST00000488906 803 ntBASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A4Q4VNC1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms