Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
APOA1P02647 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APOA1P02647 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.71■□□□□ 0.11
APOA1P02647 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.71■□□□□ 0.11
APOA1P02647 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.71■□□□□ 0.11
APOA1P02647 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOA1P02647 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOA1P02647 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.71■□□□□ 0.11
APOA1P02647 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APOA1P02647 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOA1P02647 AC023824.1-201ENST00000562945 2975 ntBASIC15.71■□□□□ 0.11
APOA1P02647 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.71■□□□□ 0.1
APOA1P02647 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
APOA1P02647 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
APOA1P02647 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.7■□□□□ 0.1
APOA1P02647 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
APOA1P02647 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
APOA1P02647 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
APOA1P02647 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
APOA1P02647 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 AC004911.1-201ENST00000416316 871 ntBASIC15.7■□□□□ 0.1
APOA1P02647 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.7■□□□□ 0.1
APOA1P02647 AC087623.3-201ENST00000607047 1098 ntBASIC15.7■□□□□ 0.1
APOA1P02647 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.7■□□□□ 0.1
APOA1P02647 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 AC105917.1-201ENST00000506637 2539 ntBASIC15.7■□□□□ 0.1
APOA1P02647 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.7■□□□□ 0.1
APOA1P02647 AL513523.2-202ENST00000427283 2040 ntBASIC15.7■□□□□ 0.1
APOA1P02647 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOA1P02647 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.7■□□□□ 0.1
APOA1P02647 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA1P02647 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA1P02647 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 SOX15-203ENST00000570788 1093 ntBASIC15.69■□□□□ 0.1
APOA1P02647 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.69■□□□□ 0.1
APOA1P02647 AL050303.2-201ENST00000619798 666 ntBASIC15.69■□□□□ 0.1
APOA1P02647 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.69■□□□□ 0.1
APOA1P02647 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.69■□□□□ 0.1
APOA1P02647 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.69■□□□□ 0.1
APOA1P02647 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOA1P02647 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
APOA1P02647 KRT8P50-201ENST00000562022 1438 ntBASIC15.68■□□□□ 0.1
APOA1P02647 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.68■□□□□ 0.1
APOA1P02647 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.68■□□□□ 0.1
APOA1P02647 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.68■□□□□ 0.1
APOA1P02647 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.68■□□□□ 0.1
APOA1P02647 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.68■□□□□ 0.1
APOA1P02647 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 MIR564-202ENST00000385049 94 ntBASIC15.68■□□□□ 0.1
APOA1P02647 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.68■□□□□ 0.1
APOA1P02647 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.68■□□□□ 0.1
APOA1P02647 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.68■□□□□ 0.1
APOA1P02647 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.68■□□□□ 0.1
APOA1P02647 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.68■□□□□ 0.1
APOA1P02647 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms