Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 AC092597.1-201ENST00000487352 616 ntBASIC14.84□□□□□ -0.03
PDCD6O75340 AC002558.1-201ENST00000488906 803 ntBASIC14.84□□□□□ -0.03
PDCD6O75340 AC093827.2-201ENST00000512654 315 ntBASIC14.84□□□□□ -0.03
PDCD6O75340 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.84□□□□□ -0.03
PDCD6O75340 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.84□□□□□ -0.03
PDCD6O75340 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.84□□□□□ -0.03
PDCD6O75340 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.84□□□□□ -0.03
PDCD6O75340 AC011558.1-201ENST00000623459 338 ntBASIC14.84□□□□□ -0.03
PDCD6O75340 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.84□□□□□ -0.03
PDCD6O75340 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.84□□□□□ -0.03
PDCD6O75340 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PDCD6O75340 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.84□□□□□ -0.03
PDCD6O75340 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PDCD6O75340 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.84□□□□□ -0.03
PDCD6O75340 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PDCD6O75340 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDCD6O75340 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PDCD6O75340 AC116353.5-201ENST00000638148 1699 ntBASIC14.84□□□□□ -0.03
PDCD6O75340 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDCD6O75340 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
PDCD6O75340 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.83□□□□□ -0.03
PDCD6O75340 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.83□□□□□ -0.03
PDCD6O75340 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
PDCD6O75340 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDCD6O75340 AC068472.1-201ENST00000474589 881 ntBASIC14.83□□□□□ -0.04
PDCD6O75340 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PDCD6O75340 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDCD6O75340 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
PDCD6O75340 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 AC124067.4-201ENST00000519691 2379 ntBASIC14.83□□□□□ -0.04
PDCD6O75340 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.83□□□□□ -0.04
PDCD6O75340 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.83□□□□□ -0.04
PDCD6O75340 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDCD6O75340 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDCD6O75340 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.83□□□□□ -0.04
PDCD6O75340 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.82□□□□□ -0.04
PDCD6O75340 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.82□□□□□ -0.04
PDCD6O75340 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
PDCD6O75340 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.82□□□□□ -0.04
PDCD6O75340 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.82□□□□□ -0.04
PDCD6O75340 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.82□□□□□ -0.04
PDCD6O75340 YBX1P2-201ENST00000489612 999 ntBASIC14.82□□□□□ -0.04
PDCD6O75340 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.82□□□□□ -0.04
PDCD6O75340 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.82□□□□□ -0.04
PDCD6O75340 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.82□□□□□ -0.04
PDCD6O75340 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.82□□□□□ -0.04
PDCD6O75340 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.82□□□□□ -0.04
PDCD6O75340 AC139887.4-201ENST00000607877 719 ntBASIC14.82□□□□□ -0.04
PDCD6O75340 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.82□□□□□ -0.04
PDCD6O75340 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.82□□□□□ -0.04
PDCD6O75340 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.82□□□□□ -0.04
PDCD6O75340 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDCD6O75340 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.82□□□□□ -0.04
PDCD6O75340 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
PDCD6O75340 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PDCD6O75340 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDCD6O75340 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDCD6O75340 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDCD6O75340 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.81□□□□□ -0.04
PDCD6O75340 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDCD6O75340 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDCD6O75340 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDCD6O75340 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDCD6O75340 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms