Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.85■□□□□ 0.45
RIPK2O43353 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.85■□□□□ 0.45
RIPK2O43353 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.85■□□□□ 0.45
RIPK2O43353 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.85■□□□□ 0.45
RIPK2O43353 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.85■□□□□ 0.45
RIPK2O43353 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.85■□□□□ 0.45
RIPK2O43353 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.85■□□□□ 0.45
RIPK2O43353 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 C2orf69P3-201ENST00000565542 1120 ntBASIC17.85■□□□□ 0.45
RIPK2O43353 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 AC092171.3-201ENST00000610122 2651 ntBASIC17.85■□□□□ 0.45
RIPK2O43353 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
RIPK2O43353 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RIPK2O43353 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 AC093525.9-201ENST00000624961 1746 ntBASIC17.84■□□□□ 0.45
RIPK2O43353 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 KRT89P-201ENST00000620027 1478 ntBASIC17.84■□□□□ 0.45
RIPK2O43353 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RIPK2O43353 LINC02199-201ENST00000506655 2702 ntBASIC17.84■□□□□ 0.45
RIPK2O43353 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.84■□□□□ 0.45
RIPK2O43353 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.84■□□□□ 0.45
RIPK2O43353 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RIPK2O43353 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.84■□□□□ 0.45
RIPK2O43353 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.84■□□□□ 0.45
RIPK2O43353 NEK4P2-201ENST00000580004 1012 ntBASIC17.84■□□□□ 0.45
RIPK2O43353 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.84■□□□□ 0.45
RIPK2O43353 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.84■□□□□ 0.45
RIPK2O43353 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RIPK2O43353 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RIPK2O43353 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
RIPK2O43353 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RIPK2O43353 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RIPK2O43353 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RIPK2O43353 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RIPK2O43353 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RIPK2O43353 PRORSD1P-201ENST00000295112 541 ntBASIC17.83■□□□□ 0.44
RIPK2O43353 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.83■□□□□ 0.44
RIPK2O43353 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.83■□□□□ 0.44
RIPK2O43353 FAM201B-201ENST00000458407 597 ntBASIC17.83■□□□□ 0.44
RIPK2O43353 AC098590.1-201ENST00000468126 897 ntBASIC17.83■□□□□ 0.44
RIPK2O43353 AC112698.1-201ENST00000510299 916 ntBASIC17.83■□□□□ 0.44
RIPK2O43353 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RIPK2O43353 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.83■□□□□ 0.44
RIPK2O43353 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.83■□□□□ 0.44
RIPK2O43353 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.83■□□□□ 0.44
RIPK2O43353 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.83■□□□□ 0.44
RIPK2O43353 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RIPK2O43353 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.83■□□□□ 0.44
RIPK2O43353 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.83■□□□□ 0.44
RIPK2O43353 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RIPK2O43353 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RIPK2O43353 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RIPK2O43353 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.83■□□□□ 0.44
RIPK2O43353 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
RIPK2O43353 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.82■□□□□ 0.44
RIPK2O43353 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.82■□□□□ 0.44
RIPK2O43353 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.82■□□□□ 0.44
RIPK2O43353 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.82■□□□□ 0.44
RIPK2O43353 MIR1238-201ENST00000408483 83 ntBASIC17.82■□□□□ 0.44
RIPK2O43353 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms