Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 GUSBP12-201ENST00000513727 720 ntBASIC18.52■□□□□ 0.56
CD248Q9HCU0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 AC009065.1-201ENST00000564055 1225 ntBASIC18.52■□□□□ 0.56
CD248Q9HCU0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 AC099336.1-202ENST00000602961 463 ntBASIC18.52■□□□□ 0.56
CD248Q9HCU0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CD248Q9HCU0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CD248Q9HCU0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CD248Q9HCU0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CD248Q9HCU0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 NSUN5P1-202ENST00000421140 1535 ntBASIC18.51■□□□□ 0.55
CD248Q9HCU0 NSUN5P2-203ENST00000457352 1529 ntBASIC18.51■□□□□ 0.55
CD248Q9HCU0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.51■□□□□ 0.55
CD248Q9HCU0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD248Q9HCU0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 AP000593.1-201ENST00000393668 712 ntBASIC18.5■□□□□ 0.55
CD248Q9HCU0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.5■□□□□ 0.55
CD248Q9HCU0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 AC068418.2-201ENST00000577309 3703 ntBASIC18.5■□□□□ 0.55
CD248Q9HCU0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD248Q9HCU0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.5■□□□□ 0.55
CD248Q9HCU0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms