Protein–RNA interactions for Protein: P61201

COPS2, COP9 signalosome complex subunit 2, humanhuman

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2P61201 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.36■□□□□ 0.53
COPS2P61201 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.36■□□□□ 0.53
COPS2P61201 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COPS2P61201 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COPS2P61201 LYSMD4-203ENST00000378904 2122 ntBASIC18.36■□□□□ 0.53
COPS2P61201 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COPS2P61201 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COPS2P61201 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.36■□□□□ 0.53
COPS2P61201 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.36■□□□□ 0.53
COPS2P61201 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS2P61201 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
COPS2P61201 LINC01311-201ENST00000565162 1445 ntBASIC18.36■□□□□ 0.53
COPS2P61201 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.36■□□□□ 0.53
COPS2P61201 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.36■□□□□ 0.53
COPS2P61201 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.36■□□□□ 0.53
COPS2P61201 AC006011.2-201ENST00000621313 1158 ntBASIC18.36■□□□□ 0.53
COPS2P61201 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS2P61201 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COPS2P61201 AC022211.2-201ENST00000585075 2527 ntBASIC18.35■□□□□ 0.53
COPS2P61201 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS2P61201 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS2P61201 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COPS2P61201 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS2P61201 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 AC011676.5-201ENST00000624864 2660 ntBASIC18.35■□□□□ 0.53
COPS2P61201 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS2P61201 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.35■□□□□ 0.53
COPS2P61201 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS2P61201 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS2P61201 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS2P61201 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.35■□□□□ 0.53
COPS2P61201 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS2P61201 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.35■□□□□ 0.53
COPS2P61201 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.35■□□□□ 0.53
COPS2P61201 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
COPS2P61201 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COPS2P61201 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COPS2P61201 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COPS2P61201 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS2P61201 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COPS2P61201 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS2P61201 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
COPS2P61201 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.34■□□□□ 0.53
COPS2P61201 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.34■□□□□ 0.53
COPS2P61201 AC002558.1-201ENST00000488906 803 ntBASIC18.34■□□□□ 0.53
COPS2P61201 VENTXP5-201ENST00000523979 775 ntBASIC18.34■□□□□ 0.53
COPS2P61201 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.34■□□□□ 0.53
COPS2P61201 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.34■□□□□ 0.53
COPS2P61201 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.34■□□□□ 0.53
COPS2P61201 AC018695.7-201ENST00000624587 2492 ntBASIC18.34■□□□□ 0.53
COPS2P61201 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COPS2P61201 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS2P61201 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms