Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRTM1Q9HBL6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
LRTM1Q9HBL6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRTM1Q9HBL6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRTM1Q9HBL6 LYSMD4-203ENST00000378904 2122 ntBASIC16.96■□□□□ 0.3
LRTM1Q9HBL6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRTM1Q9HBL6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.96■□□□□ 0.3
LRTM1Q9HBL6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 KRT18P57-201ENST00000443599 1254 ntBASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 AC005332.3-201ENST00000589904 676 ntBASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.95■□□□□ 0.3
LRTM1Q9HBL6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 AC112907.2-201ENST00000448639 330 ntBASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 VENTXP5-201ENST00000523979 775 ntBASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 AL390719.2-201ENST00000606993 987 ntBASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 AL121761.2-201ENST00000598007 1648 ntBASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 AC016396.2-201ENST00000562575 1417 ntBASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRTM1Q9HBL6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms