Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.65■□□□□ 0.58
CALR3Q96L12 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CALR3Q96L12 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CALR3Q96L12 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CALR3Q96L12 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CALR3Q96L12 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CALR3Q96L12 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CALR3Q96L12 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CALR3Q96L12 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CALR3Q96L12 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALR3Q96L12 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CALR3Q96L12 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CALR3Q96L12 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.63■□□□□ 0.57
CALR3Q96L12 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.63■□□□□ 0.57
CALR3Q96L12 MYCLP1-201ENST00000372451 1075 ntBASIC18.63■□□□□ 0.57
CALR3Q96L12 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 LIN28AP1-201ENST00000429574 405 ntBASIC18.63■□□□□ 0.57
CALR3Q96L12 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.63■□□□□ 0.57
CALR3Q96L12 MTCL1P1-201ENST00000446207 792 ntBASIC18.63■□□□□ 0.57
CALR3Q96L12 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.63■□□□□ 0.57
CALR3Q96L12 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.63■□□□□ 0.57
CALR3Q96L12 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CALR3Q96L12 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.63■□□□□ 0.57
CALR3Q96L12 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
CALR3Q96L12 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CALR3Q96L12 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CALR3Q96L12 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.62■□□□□ 0.57
CALR3Q96L12 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
CALR3Q96L12 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 MIR662-201ENST00000384847 95 ntBASIC18.62■□□□□ 0.57
CALR3Q96L12 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.62■□□□□ 0.57
CALR3Q96L12 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.62■□□□□ 0.57
CALR3Q96L12 SLC25A3P1-201ENST00000443844 931 ntBASIC18.62■□□□□ 0.57
CALR3Q96L12 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.62■□□□□ 0.57
CALR3Q96L12 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.62■□□□□ 0.57
CALR3Q96L12 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CALR3Q96L12 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms