Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 AC009336.1-201ENST00000608941 1553 ntBASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 AC007613.1-201ENST00000572811 2597 ntBASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 AC148477.5-201ENST00000625164 1645 ntBASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 AL031284.1-201ENST00000419297 478 ntBASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 PRYP5-201ENST00000451909 266 ntBASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 AP001005.1-201ENST00000571755 1248 ntBASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMARCD1Q96GM5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 HLA-J-201ENST00000462773 1622 ntBASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 SIGLEC30P-201ENST00000455569 941 ntBASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 AC004817.3-201ENST00000602957 2129 ntBASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 HLA-A-201ENST00000376802 1334 ntBASIC18.49■□□□□ 0.55
SMARCD1Q96GM5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 AL355312.1-201ENST00000407115 2176 ntBASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMARCD1Q96GM5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms