Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC006449.5-201ENST00000610658 2098 ntBASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 LYSMD4-203ENST00000378904 2122 ntBASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 FSCN1P1-201ENST00000568912 1481 ntBASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 AC046185.3-201ENST00000623228 1824 ntBASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CNIH3Q8TBE1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 LINC00167-201ENST00000530583 1419 ntBASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 AL662844.4-201ENST00000606367 2838 ntBASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CNIH3Q8TBE1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 SLC25A1P4-201ENST00000567977 778 ntBASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms