Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.1■□□□□ 0.17
RBM48Q5RL73 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 AL138781.1-201ENST00000566567 1274 ntBASIC16.1■□□□□ 0.17
RBM48Q5RL73 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.1■□□□□ 0.17
RBM48Q5RL73 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RBM48Q5RL73 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 RNF216P1-203ENST00000404404 2427 ntBASIC16.09■□□□□ 0.17
RBM48Q5RL73 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 AC008040.2-201ENST00000461049 708 ntBASIC16.09■□□□□ 0.17
RBM48Q5RL73 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RBM48Q5RL73 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.09■□□□□ 0.17
RBM48Q5RL73 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.08■□□□□ 0.17
RBM48Q5RL73 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.08■□□□□ 0.17
RBM48Q5RL73 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RBM48Q5RL73 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.08■□□□□ 0.17
RBM48Q5RL73 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 KRT18P23-201ENST00000435622 1283 ntBASIC16.08■□□□□ 0.16
RBM48Q5RL73 NCF1B-203ENST00000435988 1254 ntBASIC16.08■□□□□ 0.16
RBM48Q5RL73 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.08■□□□□ 0.16
RBM48Q5RL73 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RBM48Q5RL73 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RBM48Q5RL73 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms