Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIX6O95475 AC022188.1-201ENST00000620960 1664 ntBASIC14.77□□□□□ -0.04
SIX6O95475 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.77□□□□□ -0.04
SIX6O95475 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.77□□□□□ -0.04
SIX6O95475 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.77□□□□□ -0.04
SIX6O95475 NBPF21P-201ENST00000425093 1451 ntBASIC14.77□□□□□ -0.04
SIX6O95475 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIX6O95475 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIX6O95475 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIX6O95475 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIX6O95475 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.77□□□□□ -0.04
SIX6O95475 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SIX6O95475 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.77□□□□□ -0.04
SIX6O95475 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SIX6O95475 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SIX6O95475 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.77□□□□□ -0.04
SIX6O95475 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SIX6O95475 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIX6O95475 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SIX6O95475 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SIX6O95475 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.77□□□□□ -0.05
SIX6O95475 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.77□□□□□ -0.05
SIX6O95475 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.77□□□□□ -0.05
SIX6O95475 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.77□□□□□ -0.05
SIX6O95475 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 AF201337.1-201ENST00000520239 748 ntBASIC14.77□□□□□ -0.05
SIX6O95475 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.77□□□□□ -0.05
SIX6O95475 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 PNMA6B-201ENST00000538162 1200 ntBASIC14.77□□□□□ -0.05
SIX6O95475 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.77□□□□□ -0.05
SIX6O95475 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.77□□□□□ -0.05
SIX6O95475 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.77□□□□□ -0.05
SIX6O95475 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.77□□□□□ -0.05
SIX6O95475 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.77□□□□□ -0.05
SIX6O95475 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SIX6O95475 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SIX6O95475 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.77□□□□□ -0.05
SIX6O95475 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SIX6O95475 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
SIX6O95475 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIX6O95475 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 CYP2T1P-202ENST00000641596 2535 ntBASIC14.76□□□□□ -0.05
SIX6O95475 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.76□□□□□ -0.05
SIX6O95475 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
SIX6O95475 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.76□□□□□ -0.05
SIX6O95475 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.76□□□□□ -0.05
SIX6O95475 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 AC092118.2-201ENST00000613495 667 ntBASIC14.76□□□□□ -0.05
SIX6O95475 AC008622.2-201ENST00000617006 1229 ntBASIC14.76□□□□□ -0.05
SIX6O95475 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.76□□□□□ -0.05
SIX6O95475 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX6O95475 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 AL513523.2-202ENST00000427283 2040 ntBASIC14.76□□□□□ -0.05
SIX6O95475 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 AC024909.3-201ENST00000611513 2257 ntBASIC14.76□□□□□ -0.05
SIX6O95475 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 LINC02228-204ENST00000642115 2962 ntBASIC14.76□□□□□ -0.05
SIX6O95475 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX6O95475 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms