Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 MIR3180-4-201ENST00000582223 153 ntBASIC19.02■□□□□ 0.64
USP27XA6NNY8 AC116407.2-201ENST00000613639 860 ntBASIC19.02■□□□□ 0.64
USP27XA6NNY8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.02■□□□□ 0.64
USP27XA6NNY8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP27XA6NNY8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
USP27XA6NNY8 AC092850.2-201ENST00000623821 2697 ntBASIC19.02■□□□□ 0.63
USP27XA6NNY8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
USP27XA6NNY8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP27XA6NNY8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.02■□□□□ 0.63
USP27XA6NNY8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP27XA6NNY8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
USP27XA6NNY8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP27XA6NNY8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 OR6D1P-202ENST00000641007 5290 ntBASIC19.01■□□□□ 0.63
USP27XA6NNY8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 WWOX-216ENST00000569818 525 ntBASIC19.01■□□□□ 0.63
USP27XA6NNY8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 AC112497.1-201ENST00000624824 639 ntBASIC19.01■□□□□ 0.63
USP27XA6NNY8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP27XA6NNY8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP27XA6NNY8 AC024909.3-201ENST00000611513 2257 ntBASIC19■□□□□ 0.63
USP27XA6NNY8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP27XA6NNY8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 LINC01311-201ENST00000565162 1445 ntBASIC19■□□□□ 0.63
USP27XA6NNY8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19■□□□□ 0.63
USP27XA6NNY8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19■□□□□ 0.63
USP27XA6NNY8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19■□□□□ 0.63
USP27XA6NNY8 AC010240.3-201ENST00000607688 395 ntBASIC19■□□□□ 0.63
USP27XA6NNY8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19■□□□□ 0.63
USP27XA6NNY8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19■□□□□ 0.63
USP27XA6NNY8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19■□□□□ 0.63
USP27XA6NNY8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP27XA6NNY8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19■□□□□ 0.63
USP27XA6NNY8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP27XA6NNY8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP27XA6NNY8 AC105917.1-201ENST00000506637 2539 ntBASIC18.99■□□□□ 0.63
USP27XA6NNY8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP27XA6NNY8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP27XA6NNY8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP27XA6NNY8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
USP27XA6NNY8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.99■□□□□ 0.63
USP27XA6NNY8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.99■□□□□ 0.63
USP27XA6NNY8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.99■□□□□ 0.63
USP27XA6NNY8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP27XA6NNY8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
USP27XA6NNY8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms