Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 RNF216P1-203ENST00000404404 2427 ntBASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 AC096733.2-201ENST00000609937 1394 ntBASIC15.11■□□□□ 0.01
SMIM4Q8WVI0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 LINC00167-201ENST00000530583 1419 ntBASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 KRT17P3-201ENST00000420566 1262 ntBASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 B3GAT3P1-201ENST00000471720 806 ntBASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 MIR4674-201ENST00000582457 87 ntBASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 MIR6786-201ENST00000616843 113 ntBASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM4Q8WVI0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 LINC01311-201ENST00000565162 1445 ntBASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 AC026271.2-201ENST00000428091 497 ntBASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 NCF1B-203ENST00000435988 1254 ntBASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM4Q8WVI0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SMIM4Q8WVI0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SMIM4Q8WVI0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 AC092171.3-201ENST00000610122 2651 ntBASIC15.08■□□□□ 0
SMIM4Q8WVI0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms