Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.25■□□□□ 0.19
TO15178 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.25■□□□□ 0.19
TO15178 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.25■□□□□ 0.19
TO15178 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.25■□□□□ 0.19
TO15178 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.25■□□□□ 0.19
TO15178 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.25■□□□□ 0.19
TO15178 IGHV3-52-201ENST00000519770 353 ntBASIC16.25■□□□□ 0.19
TO15178 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.25■□□□□ 0.19
TO15178 AC091304.2-201ENST00000564639 760 ntBASIC16.25■□□□□ 0.19
TO15178 AC111152.3-201ENST00000569699 673 ntBASIC16.25■□□□□ 0.19
TO15178 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.25■□□□□ 0.19
TO15178 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.25■□□□□ 0.19
TO15178 AL355312.1-201ENST00000407115 2176 ntBASIC16.25■□□□□ 0.19
TO15178 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.25■□□□□ 0.19
TO15178 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.25■□□□□ 0.19
TO15178 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TO15178 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TO15178 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.24■□□□□ 0.19
TO15178 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TO15178 AC018470.1-201ENST00000624790 3129 ntBASIC16.24■□□□□ 0.19
TO15178 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.24■□□□□ 0.19
TO15178 SIRPAP1-201ENST00000448467 1770 ntBASIC16.24■□□□□ 0.19
TO15178 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.24■□□□□ 0.19
TO15178 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.24■□□□□ 0.19
TO15178 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.24■□□□□ 0.19
TO15178 AP000867.4-201ENST00000641616 219 ntBASIC16.24■□□□□ 0.19
TO15178 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.24■□□□□ 0.19
TO15178 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.24■□□□□ 0.19
TO15178 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.24■□□□□ 0.19
TO15178 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.24■□□□□ 0.19
TO15178 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TO15178 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.23■□□□□ 0.19
TO15178 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TO15178 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
TO15178 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TO15178 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.23■□□□□ 0.19
TO15178 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.23■□□□□ 0.19
TO15178 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 KRT8P10-201ENST00000450021 1447 ntBASIC16.23■□□□□ 0.19
TO15178 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.23■□□□□ 0.19
TO15178 DUSP5P1-201ENST00000441325 1139 ntBASIC16.23■□□□□ 0.19
TO15178 ABCD1P5-201ENST00000445663 754 ntBASIC16.23■□□□□ 0.19
TO15178 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.23■□□□□ 0.19
TO15178 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.23■□□□□ 0.19
TO15178 AC109462.3-201ENST00000573934 613 ntBASIC16.23■□□□□ 0.19
TO15178 AC012313.10-201ENST00000623509 926 ntBASIC16.23■□□□□ 0.19
TO15178 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TO15178 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.23■□□□□ 0.19
TO15178 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.23■□□□□ 0.19
TO15178 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TO15178 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 PMPCAP1-201ENST00000508114 1576 ntBASIC16.22■□□□□ 0.19
TO15178 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TO15178 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms