Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 KRT18P31-201ENST00000506277 1292 ntBASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 IGHV3-52-201ENST00000519770 353 ntBASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ECHDC1Q9NTX5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 AL138688.1-201ENST00000624851 1594 ntBASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 AL732292.2-201ENST00000609649 430 ntBASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 AL139327.4-201ENST00000612362 153 ntBASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ECHDC1Q9NTX5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 LYSMD4-203ENST00000378904 2122 ntBASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 MYCLP1-201ENST00000372451 1075 ntBASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 AC111152.3-201ENST00000569699 673 ntBASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ECHDC1Q9NTX5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms