Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 AC007029.1-201ENST00000604183 313 ntBASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 LINC01971-201ENST00000617888 1048 ntBASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 AC005703.6-201ENST00000623265 1329 ntBASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 AJ011931.1-201ENST00000618749 2492 ntBASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 PHGDH-210ENST00000641115 1638 ntBASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CYSTM1Q9H1C7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 AC133637.1-201ENST00000624115 1537 ntBASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 KRT8P17-201ENST00000453110 1448 ntBASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 LONRF2P2-201ENST00000439212 571 ntBASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 GRAMD4P7-201ENST00000578182 1232 ntBASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms