Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.04■□□□□ 0.48
KDM1BQ8NB78 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 AC073648.2-201ENST00000510116 352 ntBASIC18.04■□□□□ 0.48
KDM1BQ8NB78 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 AL139288.1-201ENST00000623748 933 ntBASIC18.04■□□□□ 0.48
KDM1BQ8NB78 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDM1BQ8NB78 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 AC116407.2-201ENST00000613639 860 ntBASIC18.03■□□□□ 0.48
KDM1BQ8NB78 BX640515.1-201ENST00000617215 977 ntBASIC18.03■□□□□ 0.48
KDM1BQ8NB78 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.03■□□□□ 0.48
KDM1BQ8NB78 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 RPS2P28-201ENST00000314255 741 ntBASIC18.02■□□□□ 0.48
KDM1BQ8NB78 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 AL031284.1-201ENST00000419297 478 ntBASIC18.02■□□□□ 0.48
KDM1BQ8NB78 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 RNPS1P1-201ENST00000507437 918 ntBASIC18.02■□□□□ 0.48
KDM1BQ8NB78 AC010460.3-201ENST00000511359 1579 ntBASIC18.02■□□□□ 0.48
KDM1BQ8NB78 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 AD001527.2-201ENST00000622994 785 ntBASIC18.02■□□□□ 0.48
KDM1BQ8NB78 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KDM1BQ8NB78 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.02■□□□□ 0.47
KDM1BQ8NB78 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KDM1BQ8NB78 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
KDM1BQ8NB78 FZD10-202ENST00000539839 3282 ntBASIC18.02■□□□□ 0.47
KDM1BQ8NB78 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KDM1BQ8NB78 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KDM1BQ8NB78 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms