Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 STK25P1-201ENST00000585406 838 ntBASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01555Q8NAE3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 TPM4P1-201ENST00000436100 807 ntBASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 FAAHP1-202ENST00000446499 1238 ntBASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 IGHV3-52-201ENST00000519770 353 ntBASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 AC104692.2-201ENST00000603054 253 ntBASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 AL121912.1-201ENST00000603683 238 ntBASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01555Q8NAE3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01555Q8NAE3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 AC073592.4-201ENST00000623827 446 ntBASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 TP73-AS1-207ENST00000624167 988 ntBASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01555Q8NAE3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms