Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.44■□□□□ 0.54
MTHFRP42898 RPS15P9-201ENST00000494093 319 ntBASIC18.44■□□□□ 0.54
MTHFRP42898 AC011467.4-201ENST00000594891 528 ntBASIC18.44■□□□□ 0.54
MTHFRP42898 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.44■□□□□ 0.54
MTHFRP42898 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.44■□□□□ 0.54
MTHFRP42898 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.44■□□□□ 0.54
MTHFRP42898 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
MTHFRP42898 GPR89P-201ENST00000407924 1495 ntBASIC18.44■□□□□ 0.54
MTHFRP42898 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.44■□□□□ 0.54
MTHFRP42898 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MTHFRP42898 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTHFRP42898 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MTHFRP42898 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
MTHFRP42898 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.43■□□□□ 0.54
MTHFRP42898 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
MTHFRP42898 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.43■□□□□ 0.54
MTHFRP42898 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MTHFRP42898 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 MIR770-201ENST00000390219 98 ntBASIC18.43■□□□□ 0.54
MTHFRP42898 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.43■□□□□ 0.54
MTHFRP42898 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.43■□□□□ 0.54
MTHFRP42898 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.43■□□□□ 0.54
MTHFRP42898 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.43■□□□□ 0.54
MTHFRP42898 AC004790.2-201ENST00000623588 572 ntBASIC18.43■□□□□ 0.54
MTHFRP42898 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
MTHFRP42898 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MTHFRP42898 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.43■□□□□ 0.54
MTHFRP42898 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MTHFRP42898 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.43■□□□□ 0.54
MTHFRP42898 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
MTHFRP42898 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTHFRP42898 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.43■□□□□ 0.54
MTHFRP42898 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.43■□□□□ 0.54
MTHFRP42898 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MTHFRP42898 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.42■□□□□ 0.54
MTHFRP42898 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.42■□□□□ 0.54
MTHFRP42898 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.42■□□□□ 0.54
MTHFRP42898 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.42■□□□□ 0.54
MTHFRP42898 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.42■□□□□ 0.54
MTHFRP42898 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.42■□□□□ 0.54
MTHFRP42898 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.42■□□□□ 0.54
MTHFRP42898 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.42■□□□□ 0.54
MTHFRP42898 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.42■□□□□ 0.54
MTHFRP42898 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.42■□□□□ 0.54
MTHFRP42898 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTHFRP42898 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTHFRP42898 AC007613.1-201ENST00000572811 2597 ntBASIC18.41■□□□□ 0.54
MTHFRP42898 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.41■□□□□ 0.54
MTHFRP42898 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MTHFRP42898 AL353593.2-201ENST00000602529 1483 ntBASIC18.41■□□□□ 0.54
MTHFRP42898 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTHFRP42898 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 SIGLEC30P-201ENST00000455569 941 ntBASIC18.41■□□□□ 0.54
MTHFRP42898 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.41■□□□□ 0.54
MTHFRP42898 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.41■□□□□ 0.54
MTHFRP42898 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.41■□□□□ 0.54
MTHFRP42898 AC106028.4-201ENST00000614509 607 ntBASIC18.41■□□□□ 0.54
MTHFRP42898 AC010654.1-201ENST00000615722 808 ntBASIC18.41■□□□□ 0.54
MTHFRP42898 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTHFRP42898 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
MTHFRP42898 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.41■□□□□ 0.54
MTHFRP42898 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
MTHFRP42898 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms