Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 AC074051.2-201ENST00000565115 352 ntBASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 PKD1P1-201ENST00000458669 6805 ntBASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 AC233702.3-201ENST00000578656 1387 ntBASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NCKIPSDQ9NZQ3 AC106820.2-201ENST00000563775 3264 ntBASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 AL160237.2-201ENST00000556165 472 ntBASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 AL732292.2-201ENST00000609649 430 ntBASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCKIPSDQ9NZQ3 AC012317.2-201ENST00000623305 2251 ntBASIC17.89■□□□□ 0.46
NCKIPSDQ9NZQ3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCKIPSDQ9NZQ3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms