Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 AC073912.3-201ENST00000624414 853 ntBASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 AC078925.2-201ENST00000624013 1973 ntBASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 PAUPAR-201ENST00000630360 2965 ntBASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YTHDF3Q7Z739 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 ECEL1P3-201ENST00000427961 737 ntBASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YTHDF3Q7Z739 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 PNMA6B-201ENST00000538162 1200 ntBASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 HLA-A-209ENST00000638375 975 ntBASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 AL109659.2-201ENST00000606809 1674 ntBASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 LINC02228-204ENST00000642115 2962 ntBASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms