Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.14□□□□□ -0.153e-10■■■□□ 16.6
RPS3P23396 ADPGK-209ENST00000567733 525 ntTSL 513.4□□□□□ -0.265e-10■■■□□ 16.6
RPS3P23396 ZFP36L1-202ENST00000439696 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.672e-6■■■□□ 16.6
RPS3P23396 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC10.54□□□□□ -0.722e-6■■■□□ 16.6
RPS3P23396 ADPGK-207ENST00000565814 795 ntTSL 57.7□□□□□ -1.185e-10■■■□□ 16.6
RPS3P23396 TUFM-202ENST00000561644 294 ntTSL 219.48■□□□□ 0.712e-9■■■□□ 16.6
RPS3P23396 APEH-216ENST00000491799 733 ntTSL 319.18■□□□□ 0.664e-9■■■□□ 16.6
RPS3P23396 APEH-211ENST00000463995 1024 ntTSL 518.03■□□□□ 0.484e-9■■■□□ 16.6
RPS3P23396 APEH-209ENST00000462439 829 ntTSL 217.53■□□□□ 0.44e-9■■■□□ 16.6
RPS3P23396 APEH-208ENST00000457042 853 ntTSL 516.53■□□□□ 0.244e-9■■■□□ 16.6
RPS3P23396 APEH-205ENST00000447436 963 ntTSL 515.83■□□□□ 0.124e-9■■■□□ 16.6
RPS3P23396 APEH-203ENST00000442186 924 ntTSL 515.82■□□□□ 0.124e-9■■■□□ 16.6
RPS3P23396 APEH-207ENST00000449966 825 ntTSL 315.82■□□□□ 0.124e-9■■■□□ 16.6
RPS3P23396 APEH-204ENST00000446089 855 ntTSL 513.66□□□□□ -0.224e-9■■■□□ 16.6
RPS3P23396 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.42e-8■■■□□ 16.6
RPS3P23396 QPRT-201ENST00000219771 913 ntTSL 217.2■□□□□ 0.342e-8■■■□□ 16.6
RPS3P23396 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.26■□□□□ 0.192e-8■■■□□ 16.6
RPS3P23396 TUBA1B-208ENST00000552984 574 ntTSL 411.01□□□□□ -0.653e-22■■■□□ 16.6
RPS3P23396 TUBA1B-203ENST00000547476 584 ntTSL 410.78□□□□□ -0.683e-22■■■□□ 16.6
RPS3P23396 TMEM214-202ENST00000321326 2700 ntTSL 219.49■□□□□ 0.714e-9■■■□□ 16.6
RPS3P23396 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.58■□□□□ 0.574e-9■■■□□ 16.6
RPS3P23396 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.44e-9■■■□□ 16.6
RPS3P23396 SEC24C-203ENST00000465076 4668 ntTSL 1 (best)10.77□□□□□ -0.698e-7■■■□□ 16.6
RPS3P23396 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.738e-7■■■□□ 16.6
RPS3P23396 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.978e-7■■■□□ 16.6
RPS3P23396 SEC24C-207ENST00000635550 3424 ntTSL 27.21□□□□□ -1.268e-7■■■□□ 16.6
RPS3P23396 CCT8-203ENST00000432178 556 ntTSL 22.77□□□□□ -1.972e-17■■■□□ 16.6
RPS3P23396 SHMT2-220ENST00000555634 964 ntTSL 511.09□□□□□ -0.635e-7■■■□□ 16.6
RPS3P23396 FLNA-209ENST00000444578 843 ntTSL 316.06■□□□□ 0.161e-7■■■□□ 16.6
RPS3P23396 CTSB-221ENST00000531502 557 ntTSL 413.68□□□□□ -0.224e-9■■■□□ 16.6
RPS3P23396 CADM1-214ENST00000543249 565 ntTSL 45.85□□□□□ -1.471e-9■■■□□ 16.6
RPS3P23396 CP-212ENST00000490639 3105 ntTSL 1 (best)5.33□□□□□ -1.561e-7■■■□□ 16.5
RPS3P23396 TM9SF3-202ENST00000443638 868 ntTSL 32.94□□□□□ -1.941e-7■■■□□ 16.5
RPS3P23396 FLNB-210ENST00000481470 6497 ntTSL 1 (best)10.01□□□□□ -0.812e-7■■■□□ 16.5
RPS3P23396 TM7SF2-217ENST00000530650 2094 ntTSL 1 (best)21.6■■□□□ 1.052e-6■■■□□ 16.5
RPS3P23396 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.922e-6■■■□□ 16.5
RPS3P23396 TM7SF2-216ENST00000529601 1671 ntTSL 220.55■□□□□ 0.882e-6■■■□□ 16.5
RPS3P23396 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.732e-6■■■□□ 16.5
RPS3P23396 TM7SF2-214ENST00000529292 1305 ntTSL 519.36■□□□□ 0.692e-6■■■□□ 16.5
RPS3P23396 SLC52A2-207ENST00000526891 592 ntTSL 417.04■□□□□ 0.321e-6■■■□□ 16.5
RPS3P23396 SHMT2-219ENST00000555563 895 ntTSL 513.36□□□□□ -0.276e-7■■■□□ 16.5
RPS3P23396 SHMT2-227ENST00000557269 576 ntTSL 512.61□□□□□ -0.396e-7■■■□□ 16.5
RPS3P23396 SHMT2-223ENST00000556689 768 ntTSL 311.96□□□□□ -0.496e-7■■■□□ 16.5
RPS3P23396 SHMT2-213ENST00000554600 837 ntTSL 210.34□□□□□ -0.756e-7■■■□□ 16.5
RPS3P23396 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.257e-7■■■□□ 16.5
RPS3P23396 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.887e-7■■■□□ 16.5
RPS3P23396 CDC20-204ENST00000482046 422 ntTSL 29.85□□□□□ -0.831e-6■■■□□ 16.5
RPS3P23396 SLC38A2-212ENST00000552703 528 ntTSL 24.71□□□□□ -1.662e-23■■■□□ 16.5
RPS3P23396 COPG1-207ENST00000513410 545 ntTSL 213.25□□□□□ -0.295e-9■■■□□ 16.5
RPS3P23396 HM13-203ENST00000344042 847 ntTSL 513.27□□□□□ -0.297e-11■■■□□ 16.5
RPS3P23396 NCOA4-203ENST00000580070 1755 ntTSL 2 BASIC11.99□□□□□ -0.493e-7■■■□□ 16.5
RPS3P23396 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC10.14□□□□□ -0.793e-7■■■□□ 16.5
RPS3P23396 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.913e-7■■■□□ 16.5
RPS3P23396 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.38□□□□□ -1.073e-7■■■□□ 16.5
RPS3P23396 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.213e-7■■■□□ 16.5
RPS3P23396 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.233e-7■■■□□ 16.5
RPS3P23396 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7□□□□□ -1.293e-7■■■□□ 16.5
RPS3P23396 RNASET2-209ENST00000499370 2164 ntTSL 210.65□□□□□ -0.73e-7■■■□□ 16.5
RPS3P23396 KRT8-202ENST00000546542 765 ntTSL 317.79■□□□□ 0.441e-43■■■□□ 16.5
RPS3P23396 PPIF-203ENST00000472580 761 ntTSL 516.49■□□□□ 0.232e-7■■■□□ 16.5
RPS3P23396 PPIF-205ENST00000498681 518 ntTSL 216.49■□□□□ 0.232e-7■■■□□ 16.5
RPS3P23396 HMGCR-207ENST00000509085 637 ntTSL 1 (best)8.3□□□□□ -1.083e-7■■■□□ 16.5
RPS3P23396 HMGCR-210ENST00000511986 487 ntTSL 57.78□□□□□ -1.163e-7■■■□□ 16.5
RPS3P23396 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.13■□□□□ 0.654e-7■■■□□ 16.5
RPS3P23396 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.584e-7■■■□□ 16.5
RPS3P23396 AARS-202ENST00000564359 590 ntTSL 310.02□□□□□ -0.817e-7■■■□□ 16.5
RPS3P23396 COPB2-210ENST00000512309 565 ntTSL 53.59□□□□□ -1.836e-7■■■□□ 16.5
RPS3P23396 SLC16A3-208ENST00000579572 863 ntTSL 319.36■□□□□ 0.692e-26■■■□□ 16.5
RPS3P23396 SLC16A3-203ENST00000577650 545 ntTSL 315.84■□□□□ 0.132e-26■■■□□ 16.5
RPS3P23396 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.628e-11■■■□□ 16.5
RPS3P23396 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.8□□□□□ -1.328e-11■■■□□ 16.5
RPS3P23396 PTBP1-205ENST00000585535 314 ntTSL 311.09□□□□□ -0.639e-9■■■□□ 16.5
RPS3P23396 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.467e-10■■■□□ 16.5
RPS3P23396 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.59□□□□□ -0.238e-7■■■□□ 16.5
RPS3P23396 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC11.51□□□□□ -0.578e-7■■■□□ 16.5
RPS3P23396 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC11.37□□□□□ -0.598e-7■■■□□ 16.5
RPS3P23396 ELP2-204ENST00000423854 2385 ntTSL 1 (best) BASIC11.14□□□□□ -0.638e-7■■■□□ 16.5
RPS3P23396 ELP2-210ENST00000539560 2542 ntTSL 1 (best)10.03□□□□□ -0.88e-7■■■□□ 16.5
RPS3P23396 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC9.09□□□□□ -0.958e-7■■■□□ 16.5
RPS3P23396 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.968e-7■■■□□ 16.5
RPS3P23396 LMNB1-207ENST00000494185 579 ntTSL 21.13□□□□□ -2.233e-7■■■□□ 16.5
RPS3P23396 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.29■□□□□ 0.044e-7■■■□□ 16.5
RPS3P23396 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.91□□□□□ -0.184e-7■■■□□ 16.5
RPS3P23396 SHMT2-217ENST00000555116 1885 ntTSL 213.9□□□□□ -0.184e-7■■■□□ 16.5
RPS3P23396 SHMT2-222ENST00000555774 2311 ntTSL 1 (best)13.32□□□□□ -0.284e-7■■■□□ 16.5
RPS3P23396 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.78□□□□□ -0.364e-7■■■□□ 16.5
RPS3P23396 SHMT2-229ENST00000557348 1659 ntTSL 212.57□□□□□ -0.44e-7■■■□□ 16.5
RPS3P23396 SHMT2-207ENST00000553837 2152 ntTSL 511.88□□□□□ -0.514e-7■■■□□ 16.5
RPS3P23396 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.145e-7■■■□□ 16.5
RPS3P23396 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC13.25□□□□□ -0.295e-7■■■□□ 16.5
RPS3P23396 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.335e-7■■■□□ 16.5
RPS3P23396 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.515e-7■■■□□ 16.5
RPS3P23396 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC11.2□□□□□ -0.625e-7■■■□□ 16.5
RPS3P23396 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.042e-7■■■□□ 16.5
RPS3P23396 SAR1A-207ENST00000452767 672 ntTSL 58.09□□□□□ -1.112e-7■■■□□ 16.5
RPS3P23396 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.252e-7■■■□□ 16.5
RPS3P23396 HM13-205ENST00000460225 443 ntTSL 513.36□□□□□ -0.277e-11■■■□□ 16.5
RPS3P23396 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.67□□□□□ -0.064e-8■■■□□ 16.5
RPS3P23396 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.184e-8■■■□□ 16.5
RPS3P23396 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.19□□□□□ -0.34e-8■■■□□ 16.5
Retrieved 100 of 24,271 protein–RNA pairs in 227.2 ms