Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.97□□□□□ -0.17
CSN3P07498 AP000550.4-202ENST00000639755 178 ntBASIC13.97□□□□□ -0.17
CSN3P07498 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSN3P07498 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.97□□□□□ -0.17
CSN3P07498 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSN3P07498 AC008764.6-201ENST00000595909 2069 ntBASIC13.97□□□□□ -0.17
CSN3P07498 ESPNP-201ENST00000270691 2015 ntBASIC13.97□□□□□ -0.17
CSN3P07498 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.96□□□□□ -0.17
CSN3P07498 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.96□□□□□ -0.17
CSN3P07498 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.96□□□□□ -0.17
CSN3P07498 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.96□□□□□ -0.17
CSN3P07498 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.96□□□□□ -0.17
CSN3P07498 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.96□□□□□ -0.17
CSN3P07498 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CSN3P07498 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.96□□□□□ -0.17
CSN3P07498 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.96□□□□□ -0.17
CSN3P07498 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.96□□□□□ -0.17
CSN3P07498 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.96□□□□□ -0.17
CSN3P07498 AC116407.4-201ENST00000623319 1061 ntBASIC13.96□□□□□ -0.17
CSN3P07498 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.96□□□□□ -0.17
CSN3P07498 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSN3P07498 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSN3P07498 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.96□□□□□ -0.18
CSN3P07498 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.96□□□□□ -0.18
CSN3P07498 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CSN3P07498 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 IER3-202ENST00000376377 1350 ntBASIC13.96□□□□□ -0.18
CSN3P07498 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSN3P07498 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CSN3P07498 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CSN3P07498 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 AC009102.3-201ENST00000623118 1491 ntBASIC13.95□□□□□ -0.18
CSN3P07498 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CSN3P07498 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.95□□□□□ -0.18
CSN3P07498 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 MIR662-201ENST00000384847 95 ntBASIC13.95□□□□□ -0.18
CSN3P07498 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.95□□□□□ -0.18
CSN3P07498 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 AL645929.1-201ENST00000420084 975 ntBASIC13.95□□□□□ -0.18
CSN3P07498 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.95□□□□□ -0.18
CSN3P07498 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.95□□□□□ -0.18
CSN3P07498 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CSN3P07498 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CSN3P07498 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CSN3P07498 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSN3P07498 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms