Protein–RNA interactions for Protein: O75419

CDC45, Cell division control protein 45 homolog, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45O75419 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC45O75419 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.53■■□□□ 1.04
CDC45O75419 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC45O75419 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC45O75419 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CDC45O75419 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC45O75419 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC45O75419 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CDC45O75419 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.52■■□□□ 1.04
CDC45O75419 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CDC45O75419 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDC45O75419 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CDC45O75419 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.52■■□□□ 1.04
CDC45O75419 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDC45O75419 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC45O75419 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CDC45O75419 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.52■■□□□ 1.04
CDC45O75419 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.52■■□□□ 1.04
CDC45O75419 AC005332.3-201ENST00000589904 676 ntBASIC21.52■■□□□ 1.04
CDC45O75419 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC45O75419 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC45O75419 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.52■■□□□ 1.03
CDC45O75419 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
CDC45O75419 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
CDC45O75419 AL121761.2-201ENST00000598007 1648 ntBASIC21.51■■□□□ 1.03
CDC45O75419 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC45O75419 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CDC45O75419 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
CDC45O75419 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC45O75419 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC45O75419 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.51■■□□□ 1.03
CDC45O75419 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC45O75419 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC45O75419 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDC45O75419 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDC45O75419 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.51■■□□□ 1.03
CDC45O75419 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC45O75419 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC45O75419 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC45O75419 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDC45O75419 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 AC096633.1-201ENST00000422446 749 ntBASIC21.5■■□□□ 1.03
CDC45O75419 RNF126P1-202ENST00000569893 925 ntBASIC21.5■■□□□ 1.03
CDC45O75419 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.5■■□□□ 1.03
CDC45O75419 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDC45O75419 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC45O75419 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDC45O75419 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CDC45O75419 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC45O75419 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC45O75419 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC45O75419 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC45O75419 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.49■■□□□ 1.03
CDC45O75419 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC45O75419 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC45O75419 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms