Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 LINC01238-205ENST00000567549 1107 ntBASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 AC132938.6-201ENST00000623828 1655 ntBASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 AC073508.3-201ENST00000619697 1419 ntBASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2AAQ96QV6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AC067852.2-201ENST00000590513 2313 ntBASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 TSPY12P-201ENST00000421279 868 ntBASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 KRT18P65-201ENST00000439811 1286 ntBASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AL359075.1-203ENST00000462729 1002 ntBASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AP003733.1-201ENST00000491725 852 ntBASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AC079602.3-201ENST00000623931 403 ntBASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2AAQ96QV6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 LINC00167-201ENST00000530583 1419 ntBASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms