Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARID3AQ99856 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.23■□□□□ 0.83
ARID3AQ99856 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ARID3AQ99856 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.23■□□□□ 0.83
ARID3AQ99856 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 AC083906.6-201ENST00000641366 219 ntBASIC20.23■□□□□ 0.83
ARID3AQ99856 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARID3AQ99856 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.23■□□□□ 0.83
ARID3AQ99856 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ARID3AQ99856 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ARID3AQ99856 FLJ38576-201ENST00000623820 2459 ntBASIC20.22■□□□□ 0.83
ARID3AQ99856 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.22■□□□□ 0.83
ARID3AQ99856 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 AC103702.1-201ENST00000548801 2630 ntBASIC20.22■□□□□ 0.83
ARID3AQ99856 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.22■□□□□ 0.83
ARID3AQ99856 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ARID3AQ99856 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
ARID3AQ99856 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.22■□□□□ 0.83
ARID3AQ99856 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.22■□□□□ 0.83
ARID3AQ99856 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ARID3AQ99856 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.22■□□□□ 0.83
ARID3AQ99856 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.22■□□□□ 0.83
ARID3AQ99856 AC132872.4-202ENST00000622924 2756 ntBASIC20.22■□□□□ 0.83
ARID3AQ99856 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC20.22■□□□□ 0.83
ARID3AQ99856 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARID3AQ99856 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.22■□□□□ 0.83
ARID3AQ99856 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ARID3AQ99856 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.21■□□□□ 0.83
ARID3AQ99856 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.21■□□□□ 0.83
ARID3AQ99856 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ARID3AQ99856 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.21■□□□□ 0.83
ARID3AQ99856 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.21■□□□□ 0.83
ARID3AQ99856 BX088651.1-201ENST00000540551 451 ntBASIC20.21■□□□□ 0.83
ARID3AQ99856 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
ARID3AQ99856 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ARID3AQ99856 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ARID3AQ99856 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ARID3AQ99856 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARID3AQ99856 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARID3AQ99856 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARID3AQ99856 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARID3AQ99856 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ARID3AQ99856 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARID3AQ99856 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.2■□□□□ 0.82
ARID3AQ99856 KRT8P32-201ENST00000512863 1461 ntBASIC20.2■□□□□ 0.82
ARID3AQ99856 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC20.2■□□□□ 0.82
ARID3AQ99856 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARID3AQ99856 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms